Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.34■■□□□ 1.33
VcanQ62059 Gm9806-201ENSMUST00000051080 552 ntBASIC23.34■■□□□ 1.33
VcanQ62059 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VcanQ62059 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
VcanQ62059 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.32■■□□□ 1.32
VcanQ62059 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.32■■□□□ 1.32
VcanQ62059 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.32■■□□□ 1.32
VcanQ62059 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
VcanQ62059 Gm11687-201ENSMUST00000118911 886 ntBASIC23.31■■□□□ 1.32
VcanQ62059 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.31■■□□□ 1.32
VcanQ62059 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VcanQ62059 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VcanQ62059 Gm7332-201ENSMUST00000118351 454 ntBASIC23.31■■□□□ 1.32
VcanQ62059 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
VcanQ62059 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
VcanQ62059 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
VcanQ62059 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
VcanQ62059 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.29■■□□□ 1.32
VcanQ62059 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.28■■□□□ 1.32
VcanQ62059 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.28■■□□□ 1.32
VcanQ62059 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
VcanQ62059 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
VcanQ62059 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.26■■□□□ 1.31
VcanQ62059 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
VcanQ62059 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
VcanQ62059 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.25■■□□□ 1.31
VcanQ62059 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
VcanQ62059 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.24■■□□□ 1.31
VcanQ62059 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
VcanQ62059 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
VcanQ62059 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.22■■□□□ 1.31
VcanQ62059 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
VcanQ62059 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
VcanQ62059 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
VcanQ62059 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.2■■□□□ 1.3
VcanQ62059 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VcanQ62059 Gm16437-201ENSMUST00000025669 507 ntBASIC23.2■■□□□ 1.3
VcanQ62059 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VcanQ62059 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
VcanQ62059 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
VcanQ62059 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
VcanQ62059 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
VcanQ62059 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
VcanQ62059 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.18■■□□□ 1.3
VcanQ62059 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
VcanQ62059 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.17■■□□□ 1.3
VcanQ62059 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
VcanQ62059 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
VcanQ62059 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
VcanQ62059 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
VcanQ62059 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VcanQ62059 Gm15546-201ENSMUST00000122095 826 ntBASIC23.14■■□□□ 1.3
VcanQ62059 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
VcanQ62059 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
VcanQ62059 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.13■■□□□ 1.29
VcanQ62059 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
VcanQ62059 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VcanQ62059 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VcanQ62059 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VcanQ62059 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.11■■□□□ 1.29
VcanQ62059 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.11■■□□□ 1.29
VcanQ62059 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VcanQ62059 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VcanQ62059 Gm14523-201ENSMUST00000117260 558 ntBASIC23.09■■□□□ 1.29
VcanQ62059 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VcanQ62059 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
VcanQ62059 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VcanQ62059 Serp2-204ENSMUST00000228055 705 ntBASIC23.09■■□□□ 1.29
VcanQ62059 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
VcanQ62059 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VcanQ62059 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
VcanQ62059 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
VcanQ62059 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VcanQ62059 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VcanQ62059 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.07■■□□□ 1.28
VcanQ62059 Gm5921-201ENSMUST00000075898 882 ntBASIC23.07■■□□□ 1.28
VcanQ62059 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.07■■□□□ 1.28
VcanQ62059 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
VcanQ62059 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
VcanQ62059 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.05■■□□□ 1.28
VcanQ62059 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
VcanQ62059 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.04■■□□□ 1.28
VcanQ62059 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VcanQ62059 Particl-201ENSMUST00000205370 1560 ntBASIC23.04■■□□□ 1.28
VcanQ62059 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.04■■□□□ 1.28
VcanQ62059 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
VcanQ62059 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VcanQ62059 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.03■■□□□ 1.28
VcanQ62059 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VcanQ62059 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VcanQ62059 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
VcanQ62059 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.02■■□□□ 1.28
VcanQ62059 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VcanQ62059 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.01■■□□□ 1.27
VcanQ62059 Gm27502-201ENSMUST00000183495 199 ntBASIC23.01■■□□□ 1.27
VcanQ62059 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.01■■□□□ 1.27
VcanQ62059 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VcanQ62059 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23■■□□□ 1.27
VcanQ62059 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
VcanQ62059 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms