Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Cln3Q61124 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Cln3Q61124 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.01■■□□□ 1.91
Cln3Q61124 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Cln3Q61124 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27■■□□□ 1.91
Cln3Q61124 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Cln3Q61124 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.99■■□□□ 1.91
Cln3Q61124 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
Cln3Q61124 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cln3Q61124 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
Cln3Q61124 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cln3Q61124 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.96■■□□□ 1.91
Cln3Q61124 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
Cln3Q61124 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Cln3Q61124 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.95■■□□□ 1.9
Cln3Q61124 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Cln3Q61124 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.95■■□□□ 1.9
Cln3Q61124 Gm6311-201ENSMUST00000073790 878 ntBASIC26.94■■□□□ 1.9
Cln3Q61124 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Cln3Q61124 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cln3Q61124 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Cln3Q61124 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
Cln3Q61124 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Cln3Q61124 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.91■■□□□ 1.9
Cln3Q61124 Particl-201ENSMUST00000205370 1560 ntBASIC26.91■■□□□ 1.9
Cln3Q61124 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cln3Q61124 Cap2-205ENSMUST00000225824 1634 ntBASIC26.9■■□□□ 1.9
Cln3Q61124 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cln3Q61124 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.89■■□□□ 1.9
Cln3Q61124 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.89■■□□□ 1.9
Cln3Q61124 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
Cln3Q61124 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cln3Q61124 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Cln3Q61124 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cln3Q61124 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cln3Q61124 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cln3Q61124 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cln3Q61124 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cln3Q61124 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cln3Q61124 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
Cln3Q61124 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cln3Q61124 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.85■■□□□ 1.89
Cln3Q61124 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Cln3Q61124 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cln3Q61124 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.84■■□□□ 1.89
Cln3Q61124 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Cln3Q61124 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Cln3Q61124 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cln3Q61124 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Cln3Q61124 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cln3Q61124 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Cln3Q61124 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Cln3Q61124 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Cln3Q61124 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.79■■□□□ 1.88
Cln3Q61124 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cln3Q61124 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cln3Q61124 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Cln3Q61124 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
Cln3Q61124 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Cln3Q61124 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Cln3Q61124 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Cln3Q61124 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
Cln3Q61124 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Cln3Q61124 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Cln3Q61124 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Cln3Q61124 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Cln3Q61124 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cln3Q61124 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Cln3Q61124 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
Cln3Q61124 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.7■■□□□ 1.86
Cln3Q61124 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Cln3Q61124 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Cln3Q61124 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Cln3Q61124 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cln3Q61124 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.67■■□□□ 1.86
Cln3Q61124 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cln3Q61124 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Cln3Q61124 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cln3Q61124 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Cln3Q61124 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Cln3Q61124 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cln3Q61124 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cln3Q61124 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Cln3Q61124 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cln3Q61124 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cln3Q61124 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cln3Q61124 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.65■■□□□ 1.86
Cln3Q61124 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cln3Q61124 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cln3Q61124 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cln3Q61124 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.63■■□□□ 1.85
Cln3Q61124 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cln3Q61124 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Cln3Q61124 Scarna2-201ENSMUST00000157560 414 ntBASIC26.6■■□□□ 1.85
Cln3Q61124 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cln3Q61124 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Cln3Q61124 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cln3Q61124 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Cln3Q61124 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cln3Q61124 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms