Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GFI1BQ5VTD9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.11■□□□□ 0.81
GFI1BQ5VTD9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.11■□□□□ 0.81
GFI1BQ5VTD9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GFI1BQ5VTD9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GFI1BQ5VTD9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
GFI1BQ5VTD9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.1■□□□□ 0.81
GFI1BQ5VTD9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GFI1BQ5VTD9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GFI1BQ5VTD9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
GFI1BQ5VTD9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GFI1BQ5VTD9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GFI1BQ5VTD9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GFI1BQ5VTD9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
GFI1BQ5VTD9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GFI1BQ5VTD9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
GFI1BQ5VTD9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GFI1BQ5VTD9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
GFI1BQ5VTD9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GFI1BQ5VTD9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
GFI1BQ5VTD9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GFI1BQ5VTD9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GFI1BQ5VTD9 AL449106.1-201ENST00000608517 1980 ntBASIC20.06■□□□□ 0.8
GFI1BQ5VTD9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GFI1BQ5VTD9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GFI1BQ5VTD9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.06■□□□□ 0.8
GFI1BQ5VTD9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GFI1BQ5VTD9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.06■□□□□ 0.8
GFI1BQ5VTD9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GFI1BQ5VTD9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
GFI1BQ5VTD9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.05■□□□□ 0.8
GFI1BQ5VTD9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GFI1BQ5VTD9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GFI1BQ5VTD9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFI1BQ5VTD9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.04■□□□□ 0.8
GFI1BQ5VTD9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.04■□□□□ 0.8
GFI1BQ5VTD9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.04■□□□□ 0.8
GFI1BQ5VTD9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFI1BQ5VTD9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GFI1BQ5VTD9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GFI1BQ5VTD9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GFI1BQ5VTD9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.03■□□□□ 0.8
GFI1BQ5VTD9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.03■□□□□ 0.8
GFI1BQ5VTD9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
GFI1BQ5VTD9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GFI1BQ5VTD9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GFI1BQ5VTD9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.01■□□□□ 0.79
GFI1BQ5VTD9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GFI1BQ5VTD9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GFI1BQ5VTD9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GFI1BQ5VTD9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20■□□□□ 0.79
GFI1BQ5VTD9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20■□□□□ 0.79
GFI1BQ5VTD9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20■□□□□ 0.79
GFI1BQ5VTD9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GFI1BQ5VTD9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GFI1BQ5VTD9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GFI1BQ5VTD9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GFI1BQ5VTD9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GFI1BQ5VTD9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
GFI1BQ5VTD9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GFI1BQ5VTD9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GFI1BQ5VTD9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
GFI1BQ5VTD9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.96■□□□□ 0.79
GFI1BQ5VTD9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.96■□□□□ 0.79
GFI1BQ5VTD9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1BQ5VTD9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GFI1BQ5VTD9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.96■□□□□ 0.79
GFI1BQ5VTD9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1BQ5VTD9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1BQ5VTD9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
GFI1BQ5VTD9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GFI1BQ5VTD9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.94■□□□□ 0.78
GFI1BQ5VTD9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
GFI1BQ5VTD9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GFI1BQ5VTD9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GFI1BQ5VTD9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GFI1BQ5VTD9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
GFI1BQ5VTD9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
GFI1BQ5VTD9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.93■□□□□ 0.78
GFI1BQ5VTD9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.93■□□□□ 0.78
GFI1BQ5VTD9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.93■□□□□ 0.78
GFI1BQ5VTD9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GFI1BQ5VTD9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GFI1BQ5VTD9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GFI1BQ5VTD9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
GFI1BQ5VTD9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
GFI1BQ5VTD9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GFI1BQ5VTD9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GFI1BQ5VTD9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1BQ5VTD9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.89■□□□□ 0.77
GFI1BQ5VTD9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1BQ5VTD9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GFI1BQ5VTD9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
GFI1BQ5VTD9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.89■□□□□ 0.77
GFI1BQ5VTD9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
GFI1BQ5VTD9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GFI1BQ5VTD9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.88■□□□□ 0.77
GFI1BQ5VTD9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.88■□□□□ 0.77
GFI1BQ5VTD9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.87■□□□□ 0.77
GFI1BQ5VTD9 AC093323.1-202ENST00000635031 2045 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms