Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FAM78BQ5VT40 AL121749.1-202ENST00000609313 2153 ntBASIC20.36■□□□□ 0.85
FAM78BQ5VT40 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FAM78BQ5VT40 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FAM78BQ5VT40 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FAM78BQ5VT40 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FAM78BQ5VT40 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FAM78BQ5VT40 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FAM78BQ5VT40 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FAM78BQ5VT40 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FAM78BQ5VT40 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
FAM78BQ5VT40 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.34■□□□□ 0.85
FAM78BQ5VT40 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FAM78BQ5VT40 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
FAM78BQ5VT40 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
FAM78BQ5VT40 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
FAM78BQ5VT40 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
FAM78BQ5VT40 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FAM78BQ5VT40 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FAM78BQ5VT40 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FAM78BQ5VT40 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM78BQ5VT40 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM78BQ5VT40 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM78BQ5VT40 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.31■□□□□ 0.84
FAM78BQ5VT40 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.31■□□□□ 0.84
FAM78BQ5VT40 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FAM78BQ5VT40 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM78BQ5VT40 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM78BQ5VT40 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM78BQ5VT40 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
FAM78BQ5VT40 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.29■□□□□ 0.84
FAM78BQ5VT40 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM78BQ5VT40 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM78BQ5VT40 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM78BQ5VT40 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FAM78BQ5VT40 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FAM78BQ5VT40 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
FAM78BQ5VT40 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.28■□□□□ 0.84
FAM78BQ5VT40 WASH5P-204ENST00000632292 975 ntBASIC20.28■□□□□ 0.84
FAM78BQ5VT40 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
FAM78BQ5VT40 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FAM78BQ5VT40 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FAM78BQ5VT40 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FAM78BQ5VT40 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FAM78BQ5VT40 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
FAM78BQ5VT40 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM78BQ5VT40 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.26■□□□□ 0.83
FAM78BQ5VT40 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
FAM78BQ5VT40 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FAM78BQ5VT40 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM78BQ5VT40 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM78BQ5VT40 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
FAM78BQ5VT40 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.25■□□□□ 0.83
FAM78BQ5VT40 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FAM78BQ5VT40 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
FAM78BQ5VT40 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
FAM78BQ5VT40 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.24■□□□□ 0.83
FAM78BQ5VT40 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
FAM78BQ5VT40 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.23■□□□□ 0.83
FAM78BQ5VT40 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.23■□□□□ 0.83
FAM78BQ5VT40 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.23■□□□□ 0.83
FAM78BQ5VT40 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FAM78BQ5VT40 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FAM78BQ5VT40 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FAM78BQ5VT40 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
FAM78BQ5VT40 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
FAM78BQ5VT40 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.21■□□□□ 0.83
FAM78BQ5VT40 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FAM78BQ5VT40 AC010864.1-201ENST00000609407 1511 ntBASIC20.21■□□□□ 0.83
FAM78BQ5VT40 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.21■□□□□ 0.83
FAM78BQ5VT40 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM78BQ5VT40 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM78BQ5VT40 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.19■□□□□ 0.82
FAM78BQ5VT40 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
FAM78BQ5VT40 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM78BQ5VT40 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
FAM78BQ5VT40 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM78BQ5VT40 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM78BQ5VT40 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FAM78BQ5VT40 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FAM78BQ5VT40 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM78BQ5VT40 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM78BQ5VT40 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM78BQ5VT40 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
FAM78BQ5VT40 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM78BQ5VT40 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM78BQ5VT40 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.17■□□□□ 0.82
FAM78BQ5VT40 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM78BQ5VT40 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM78BQ5VT40 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.16■□□□□ 0.82
FAM78BQ5VT40 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.16■□□□□ 0.82
FAM78BQ5VT40 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
FAM78BQ5VT40 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
FAM78BQ5VT40 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.15■□□□□ 0.82
FAM78BQ5VT40 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
FAM78BQ5VT40 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
FAM78BQ5VT40 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.15■□□□□ 0.82
FAM78BQ5VT40 BX255925.1-201ENST00000566954 1854 ntBASIC20.14■□□□□ 0.81
FAM78BQ5VT40 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
FAM78BQ5VT40 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 438.9 ms