Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 LINC00273-201ENST00000539813 1452 ntBASIC30.79■■■□□ 2.52
CERKLQ49MI3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CERKLQ49MI3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.78■■■□□ 2.52
CERKLQ49MI3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
CERKLQ49MI3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CERKLQ49MI3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.78■■■□□ 2.52
CERKLQ49MI3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
CERKLQ49MI3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.77■■■□□ 2.52
CERKLQ49MI3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CERKLQ49MI3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CERKLQ49MI3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CERKLQ49MI3 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.75■■■□□ 2.51
CERKLQ49MI3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.75■■■□□ 2.51
CERKLQ49MI3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.75■■■□□ 2.51
CERKLQ49MI3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CERKLQ49MI3 AL135925.1-201ENST00000605920 1701 ntBASIC30.73■■■□□ 2.51
CERKLQ49MI3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
CERKLQ49MI3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CERKLQ49MI3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CERKLQ49MI3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
CERKLQ49MI3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.71■■■□□ 2.51
CERKLQ49MI3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.71■■■□□ 2.51
CERKLQ49MI3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.71■■■□□ 2.51
CERKLQ49MI3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.69■■■□□ 2.5
CERKLQ49MI3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CERKLQ49MI3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CERKLQ49MI3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CERKLQ49MI3 AC127502.1-201ENST00000399971 1502 ntBASIC30.67■■■□□ 2.5
CERKLQ49MI3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.66■■■□□ 2.5
CERKLQ49MI3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CERKLQ49MI3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.66■■■□□ 2.5
CERKLQ49MI3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
CERKLQ49MI3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
CERKLQ49MI3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CERKLQ49MI3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.64■■■□□ 2.5
CERKLQ49MI3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
CERKLQ49MI3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.63■■■□□ 2.49
CERKLQ49MI3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CERKLQ49MI3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
CERKLQ49MI3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CERKLQ49MI3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.61■■■□□ 2.49
CERKLQ49MI3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CERKLQ49MI3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CERKLQ49MI3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.58■■■□□ 2.49
CERKLQ49MI3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CERKLQ49MI3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CERKLQ49MI3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
CERKLQ49MI3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CERKLQ49MI3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.56■■■□□ 2.48
CERKLQ49MI3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CERKLQ49MI3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CERKLQ49MI3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CERKLQ49MI3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CERKLQ49MI3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CERKLQ49MI3 HSD17B1P1-201ENST00000590052 955 ntBASIC30.53■■■□□ 2.48
CERKLQ49MI3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
CERKLQ49MI3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
CERKLQ49MI3 AC135983.2-203ENST00000454486 1613 ntBASIC30.52■■■□□ 2.48
CERKLQ49MI3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.52■■■□□ 2.48
CERKLQ49MI3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.51■■■□□ 2.47
CERKLQ49MI3 WHAMMP2-203ENST00000563942 1603 ntBASIC30.51■■■□□ 2.47
CERKLQ49MI3 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.5■■■□□ 2.47
CERKLQ49MI3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CERKLQ49MI3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.49■■■□□ 2.47
CERKLQ49MI3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CERKLQ49MI3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.49■■■□□ 2.47
CERKLQ49MI3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
CERKLQ49MI3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
CERKLQ49MI3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
CERKLQ49MI3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.47■■■□□ 2.47
CERKLQ49MI3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CERKLQ49MI3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CERKLQ49MI3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
CERKLQ49MI3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.45■■■□□ 2.47
CERKLQ49MI3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CERKLQ49MI3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
CERKLQ49MI3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CERKLQ49MI3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CERKLQ49MI3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CERKLQ49MI3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CERKLQ49MI3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.43■■■□□ 2.46
CERKLQ49MI3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CERKLQ49MI3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.43■■■□□ 2.46
CERKLQ49MI3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.42■■■□□ 2.46
CERKLQ49MI3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CERKLQ49MI3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CERKLQ49MI3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CERKLQ49MI3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CERKLQ49MI3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
CERKLQ49MI3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CERKLQ49MI3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms