Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim63Q38HM4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim63Q38HM4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim63Q38HM4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim63Q38HM4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim63Q38HM4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim63Q38HM4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim63Q38HM4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Trim63Q38HM4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim63Q38HM4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim63Q38HM4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim63Q38HM4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim63Q38HM4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim63Q38HM4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim63Q38HM4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim63Q38HM4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim63Q38HM4 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.75■□□□□ 0.75
Trim63Q38HM4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim63Q38HM4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim63Q38HM4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim63Q38HM4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim63Q38HM4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim63Q38HM4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim63Q38HM4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim63Q38HM4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim63Q38HM4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim63Q38HM4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim63Q38HM4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim63Q38HM4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim63Q38HM4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim63Q38HM4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim63Q38HM4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Trim63Q38HM4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim63Q38HM4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Trim63Q38HM4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim63Q38HM4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim63Q38HM4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim63Q38HM4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim63Q38HM4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim63Q38HM4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim63Q38HM4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim63Q38HM4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim63Q38HM4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim63Q38HM4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim63Q38HM4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim63Q38HM4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim63Q38HM4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim63Q38HM4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trim63Q38HM4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim63Q38HM4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim63Q38HM4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trim63Q38HM4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim63Q38HM4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim63Q38HM4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim63Q38HM4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim63Q38HM4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim63Q38HM4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim63Q38HM4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim63Q38HM4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim63Q38HM4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim63Q38HM4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim63Q38HM4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim63Q38HM4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim63Q38HM4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Trim63Q38HM4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim63Q38HM4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Trim63Q38HM4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Trim63Q38HM4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim63Q38HM4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim63Q38HM4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim63Q38HM4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim63Q38HM4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim63Q38HM4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim63Q38HM4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim63Q38HM4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim63Q38HM4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim63Q38HM4 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.63■□□□□ 0.73
Trim63Q38HM4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Trim63Q38HM4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim63Q38HM4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim63Q38HM4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim63Q38HM4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim63Q38HM4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim63Q38HM4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim63Q38HM4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim63Q38HM4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim63Q38HM4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim63Q38HM4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim63Q38HM4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim63Q38HM4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim63Q38HM4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim63Q38HM4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim63Q38HM4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim63Q38HM4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim63Q38HM4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.59■□□□□ 0.73
Trim63Q38HM4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim63Q38HM4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.58■□□□□ 0.73
Trim63Q38HM4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim63Q38HM4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim63Q38HM4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms