Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.65■■□□□ 1.22
RSPO1Q2MKA7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
RSPO1Q2MKA7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RSPO1Q2MKA7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.64■■□□□ 1.22
RSPO1Q2MKA7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
RSPO1Q2MKA7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.64■■□□□ 1.21
RSPO1Q2MKA7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.64■■□□□ 1.21
RSPO1Q2MKA7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RSPO1Q2MKA7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.63■■□□□ 1.21
RSPO1Q2MKA7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RSPO1Q2MKA7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.62■■□□□ 1.21
RSPO1Q2MKA7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.62■■□□□ 1.21
RSPO1Q2MKA7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RSPO1Q2MKA7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RSPO1Q2MKA7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RSPO1Q2MKA7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RSPO1Q2MKA7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.6■■□□□ 1.21
RSPO1Q2MKA7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.59■■□□□ 1.21
RSPO1Q2MKA7 MIR3665-201ENST00000578708 105 ntBASIC22.59■■□□□ 1.21
RSPO1Q2MKA7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RSPO1Q2MKA7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RSPO1Q2MKA7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.58■■□□□ 1.21
RSPO1Q2MKA7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RSPO1Q2MKA7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RSPO1Q2MKA7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.58■■□□□ 1.2
RSPO1Q2MKA7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RSPO1Q2MKA7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RSPO1Q2MKA7 AP006261.1-201ENST00000584783 668 ntBASIC22.57■■□□□ 1.2
RSPO1Q2MKA7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.57■■□□□ 1.2
RSPO1Q2MKA7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RSPO1Q2MKA7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RSPO1Q2MKA7 MIR6090-201ENST00000622481 60 ntBASIC22.56■■□□□ 1.2
RSPO1Q2MKA7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RSPO1Q2MKA7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.55■■□□□ 1.2
RSPO1Q2MKA7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
RSPO1Q2MKA7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RSPO1Q2MKA7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RSPO1Q2MKA7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
RSPO1Q2MKA7 AP004833.2-201ENST00000532228 1454 ntBASIC22.54■■□□□ 1.2
RSPO1Q2MKA7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RSPO1Q2MKA7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
RSPO1Q2MKA7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RSPO1Q2MKA7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RSPO1Q2MKA7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RSPO1Q2MKA7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RSPO1Q2MKA7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
RSPO1Q2MKA7 DRD5P2-201ENST00000421395 2012 ntBASIC22.52■■□□□ 1.2
RSPO1Q2MKA7 AL162393.1-201ENST00000437852 946 ntBASIC22.52■■□□□ 1.2
RSPO1Q2MKA7 AC108673.1-201ENST00000510422 1159 ntBASIC22.52■■□□□ 1.2
RSPO1Q2MKA7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
RSPO1Q2MKA7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RSPO1Q2MKA7 AC087741.3-201ENST00000624270 1347 ntBASIC22.51■■□□□ 1.19
RSPO1Q2MKA7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.51■■□□□ 1.19
RSPO1Q2MKA7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.51■■□□□ 1.19
RSPO1Q2MKA7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.51■■□□□ 1.19
RSPO1Q2MKA7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RSPO1Q2MKA7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RSPO1Q2MKA7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RSPO1Q2MKA7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.5■■□□□ 1.19
RSPO1Q2MKA7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RSPO1Q2MKA7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RSPO1Q2MKA7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RSPO1Q2MKA7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RSPO1Q2MKA7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO1Q2MKA7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO1Q2MKA7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO1Q2MKA7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RSPO1Q2MKA7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.45■■□□□ 1.18
RSPO1Q2MKA7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RSPO1Q2MKA7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
RSPO1Q2MKA7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RSPO1Q2MKA7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RSPO1Q2MKA7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RSPO1Q2MKA7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RSPO1Q2MKA7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.44■■□□□ 1.18
RSPO1Q2MKA7 AC142086.6-201ENST00000621154 1765 ntBASIC22.44■■□□□ 1.18
RSPO1Q2MKA7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RSPO1Q2MKA7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RSPO1Q2MKA7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RSPO1Q2MKA7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RSPO1Q2MKA7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.41■■□□□ 1.18
RSPO1Q2MKA7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.41■■□□□ 1.18
RSPO1Q2MKA7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RSPO1Q2MKA7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
RSPO1Q2MKA7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RSPO1Q2MKA7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RSPO1Q2MKA7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RSPO1Q2MKA7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
RSPO1Q2MKA7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
RSPO1Q2MKA7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
RSPO1Q2MKA7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.39■■□□□ 1.18
RSPO1Q2MKA7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.17
RSPO1Q2MKA7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
RSPO1Q2MKA7 AC100797.4-201ENST00000631653 1827 ntBASIC22.38■■□□□ 1.17
RSPO1Q2MKA7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RSPO1Q2MKA7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RSPO1Q2MKA7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RSPO1Q2MKA7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
RSPO1Q2MKA7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RSPO1Q2MKA7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms