Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
SHROOM1Q2M3G4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
SHROOM1Q2M3G4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
SHROOM1Q2M3G4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
SHROOM1Q2M3G4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
SHROOM1Q2M3G4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SHROOM1Q2M3G4 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.77■■■□□ 2.52
SHROOM1Q2M3G4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.76■■■□□ 2.51
SHROOM1Q2M3G4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
SHROOM1Q2M3G4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.75■■■□□ 2.51
SHROOM1Q2M3G4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
SHROOM1Q2M3G4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.75■■■□□ 2.51
SHROOM1Q2M3G4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
SHROOM1Q2M3G4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
SHROOM1Q2M3G4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.74■■■□□ 2.51
SHROOM1Q2M3G4 HSD17B1P1-201ENST00000590052 955 ntBASIC30.74■■■□□ 2.51
SHROOM1Q2M3G4 LINC00273-201ENST00000539813 1452 ntBASIC30.74■■■□□ 2.51
SHROOM1Q2M3G4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SHROOM1Q2M3G4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHROOM1Q2M3G4 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
SHROOM1Q2M3G4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
SHROOM1Q2M3G4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SHROOM1Q2M3G4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
SHROOM1Q2M3G4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SHROOM1Q2M3G4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.7■■■□□ 2.5
SHROOM1Q2M3G4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
SHROOM1Q2M3G4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SHROOM1Q2M3G4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.68■■■□□ 2.5
SHROOM1Q2M3G4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SHROOM1Q2M3G4 AC127502.1-201ENST00000399971 1502 ntBASIC30.68■■■□□ 2.5
SHROOM1Q2M3G4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
SHROOM1Q2M3G4 AL135925.1-201ENST00000605920 1701 ntBASIC30.64■■■□□ 2.5
SHROOM1Q2M3G4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SHROOM1Q2M3G4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SHROOM1Q2M3G4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
SHROOM1Q2M3G4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SHROOM1Q2M3G4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
SHROOM1Q2M3G4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.63■■■□□ 2.49
SHROOM1Q2M3G4 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.63■■■□□ 2.49
SHROOM1Q2M3G4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SHROOM1Q2M3G4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SHROOM1Q2M3G4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.61■■■□□ 2.49
SHROOM1Q2M3G4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.6■■■□□ 2.49
SHROOM1Q2M3G4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.6■■■□□ 2.49
SHROOM1Q2M3G4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
SHROOM1Q2M3G4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
SHROOM1Q2M3G4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
SHROOM1Q2M3G4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SHROOM1Q2M3G4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.58■■■□□ 2.49
SHROOM1Q2M3G4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SHROOM1Q2M3G4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SHROOM1Q2M3G4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SHROOM1Q2M3G4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.57■■■□□ 2.48
SHROOM1Q2M3G4 WHAMMP2-203ENST00000563942 1603 ntBASIC30.57■■■□□ 2.48
SHROOM1Q2M3G4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SHROOM1Q2M3G4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.56■■■□□ 2.48
SHROOM1Q2M3G4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.56■■■□□ 2.48
SHROOM1Q2M3G4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.56■■■□□ 2.48
SHROOM1Q2M3G4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
SHROOM1Q2M3G4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.52■■■□□ 2.48
SHROOM1Q2M3G4 AC135983.2-203ENST00000454486 1613 ntBASIC30.51■■■□□ 2.48
SHROOM1Q2M3G4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
SHROOM1Q2M3G4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.48
SHROOM1Q2M3G4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
SHROOM1Q2M3G4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.51■■■□□ 2.47
SHROOM1Q2M3G4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.51■■■□□ 2.47
SHROOM1Q2M3G4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
SHROOM1Q2M3G4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
SHROOM1Q2M3G4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.49■■■□□ 2.47
SHROOM1Q2M3G4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
SHROOM1Q2M3G4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
SHROOM1Q2M3G4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SHROOM1Q2M3G4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SHROOM1Q2M3G4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.49■■■□□ 2.47
SHROOM1Q2M3G4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
SHROOM1Q2M3G4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SHROOM1Q2M3G4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.48■■■□□ 2.47
SHROOM1Q2M3G4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.48■■■□□ 2.47
SHROOM1Q2M3G4 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
SHROOM1Q2M3G4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
SHROOM1Q2M3G4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SHROOM1Q2M3G4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
SHROOM1Q2M3G4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SHROOM1Q2M3G4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.46■■■□□ 2.47
SHROOM1Q2M3G4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SHROOM1Q2M3G4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SHROOM1Q2M3G4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SHROOM1Q2M3G4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SHROOM1Q2M3G4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SHROOM1Q2M3G4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SHROOM1Q2M3G4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SHROOM1Q2M3G4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SHROOM1Q2M3G4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SHROOM1Q2M3G4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
SHROOM1Q2M3G4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SHROOM1Q2M3G4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.43■■■□□ 2.46
SHROOM1Q2M3G4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SHROOM1Q2M3G4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SHROOM1Q2M3G4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.42■■■□□ 2.46
SHROOM1Q2M3G4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms