Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 YMR007WYMR007W 381 nt8.55□□□□□ -1.04
CLP1Q08685 YNR064CYNR064C 873 nt8.55□□□□□ -1.04
CLP1Q08685 KES1YPL145C 1305 nt8.54□□□□□ -1.04
CLP1Q08685 YMR209CYMR209C 1374 nt8.53□□□□□ -1.04
CLP1Q08685 DIG1YPL049C 1359 nt8.53□□□□□ -1.04
CLP1Q08685 PCP1YGR101W 1041 nt8.53□□□□□ -1.04
CLP1Q08685 POP2YNR052C 1302 nt8.53□□□□□ -1.04
CLP1Q08685 SGA1YIL099W 1650 nt8.53□□□□□ -1.04
CLP1Q08685 QDR2YIL121W 1629 nt8.52□□□□□ -1.05
CLP1Q08685 YEL023CYEL023C 2049 nt8.52□□□□□ -1.05
CLP1Q08685 SER2YGR208W 930 nt8.51□□□□□ -1.05
CLP1Q08685 PHB2YGR231C 933 nt8.51□□□□□ -1.05
CLP1Q08685 CDD1YLR245C 429 nt8.51□□□□□ -1.05
CLP1Q08685 ZAP1YJL056C 2643 nt8.5□□□□□ -1.05
CLP1Q08685 HTS1YPR033C 1641 nt8.49□□□□□ -1.05
CLP1Q08685 SAC7YDR389W 1965 nt8.49□□□□□ -1.05
CLP1Q08685 ENO1YGR254W 1314 nt8.49□□□□□ -1.05
CLP1Q08685 NAM8YHR086W 1572 nt8.48□□□□□ -1.05
CLP1Q08685 ADE5,7YGL234W 2409 nt8.48□□□□□ -1.05
CLP1Q08685 KEL3YPL263C 1956 nt8.48□□□□□ -1.05
CLP1Q08685 ELO1YJL196C 933 nt8.47□□□□□ -1.05
CLP1Q08685 FCY1YPR062W 477 nt8.47□□□□□ -1.05
CLP1Q08685 YER152W-AYER152W-A 567 nt8.46□□□□□ -1.06
CLP1Q08685 SWM1YDR260C 513 nt8.44□□□□□ -1.06
CLP1Q08685 YLR280CYLR280C 351 nt8.44□□□□□ -1.06
CLP1Q08685 snR31snR31 225 nt8.44□□□□□ -1.06
CLP1Q08685 LPD1YFL018C 1500 nt8.44□□□□□ -1.06
CLP1Q08685 BUD20YLR074C 501 nt8.43□□□□□ -1.06
CLP1Q08685 SSL2YIL143C 2532 nt8.42□□□□□ -1.06
CLP1Q08685 TGA1tA(UGC)A 73 nt8.42□□□□□ -1.06
CLP1Q08685 tA(UGC)EtA(UGC)E 73 nt8.42□□□□□ -1.06
CLP1Q08685 tA(UGC)GtA(UGC)G 73 nt8.42□□□□□ -1.06
CLP1Q08685 tA(UGC)LtA(UGC)L 73 nt8.42□□□□□ -1.06
CLP1Q08685 tA(UGC)OtA(UGC)O 73 nt8.42□□□□□ -1.06
CLP1Q08685 SRP102YKL154W 735 nt8.42□□□□□ -1.06
CLP1Q08685 SDS24YBR214W 1584 nt8.42□□□□□ -1.06
CLP1Q08685 RPN14YGL004C 1254 nt8.41□□□□□ -1.06
CLP1Q08685 ERO1YML130C 1692 nt8.4□□□□□ -1.06
CLP1Q08685 YGR210CYGR210C 1236 nt8.4□□□□□ -1.06
CLP1Q08685 REX2YLR059C 810 nt8.4□□□□□ -1.06
CLP1Q08685 PUS7YOR243C 2031 nt8.39□□□□□ -1.07
CLP1Q08685 RIM2YBR192W 1134 nt8.38□□□□□ -1.07
CLP1Q08685 GID8YMR135C 1368 nt8.37□□□□□ -1.07
CLP1Q08685 SRP54YPR088C 1626 nt8.37□□□□□ -1.07
CLP1Q08685 STF1YDL130W-A 261 nt8.37□□□□□ -1.07
CLP1Q08685 MET1YKR069W 1782 nt8.36□□□□□ -1.07
CLP1Q08685 SWT21YNL187W 1074 nt8.36□□□□□ -1.07
CLP1Q08685 HAP5YOR358W 729 nt8.36□□□□□ -1.07
CLP1Q08685 YJL045WYJL045W 1905 nt8.36□□□□□ -1.07
CLP1Q08685 ITR2YOL103W 1830 nt8.36□□□□□ -1.07
CLP1Q08685 DLD3YEL071W 1491 nt8.35□□□□□ -1.07
CLP1Q08685 YOR072WYOR072W 315 nt8.35□□□□□ -1.07
CLP1Q08685 MRS6YOR370C 1812 nt8.35□□□□□ -1.07
CLP1Q08685 VBA3YCL069W 1377 nt8.35□□□□□ -1.07
CLP1Q08685 YKL053WYKL053W 375 nt8.34□□□□□ -1.07
CLP1Q08685 ODC1YPL134C 933 nt8.34□□□□□ -1.07
CLP1Q08685 YMR265CYMR265C 1386 nt8.34□□□□□ -1.07
CLP1Q08685 VMA11YPL234C 495 nt8.33□□□□□ -1.08
CLP1Q08685 PSD1YNL169C 1503 nt8.33□□□□□ -1.08
CLP1Q08685 DMA2YNL116W 1569 nt8.32□□□□□ -1.08
CLP1Q08685 YPT11YNL304W 1254 nt8.32□□□□□ -1.08
CLP1Q08685 YKL133CYKL133C 1392 nt8.32□□□□□ -1.08
CLP1Q08685 GUT1YHL032C 2130 nt8.3□□□□□ -1.08
CLP1Q08685 SUV3YPL029W 2214 nt8.3□□□□□ -1.08
CLP1Q08685 GRH1YDR517W 1119 nt8.3□□□□□ -1.08
CLP1Q08685 HRA1HRA1 564 nt8.3□□□□□ -1.08
CLP1Q08685 RSM7YJR113C 744 nt8.3□□□□□ -1.08
CLP1Q08685 YHR219WYHR219W 1875 nt8.3□□□□□ -1.08
CLP1Q08685 SNX3YOR357C 489 nt8.29□□□□□ -1.08
CLP1Q08685 YPL108WYPL108W 507 nt8.29□□□□□ -1.08
CLP1Q08685 HXT10YFL011W 1641 nt8.29□□□□□ -1.08
CLP1Q08685 CRC1YOR100C 984 nt8.28□□□□□ -1.08
CLP1Q08685 YOR343CYOR343C 327 nt8.28□□□□□ -1.08
CLP1Q08685 LSR1LSR1 1175 nt8.27□□□□□ -1.09
CLP1Q08685 RPD3YNL330C 1302 nt8.27□□□□□ -1.09
CLP1Q08685 UFD1YGR048W 1086 nt8.26□□□□□ -1.09
CLP1Q08685 YAL016C-AYAL016C-A 315 nt8.25□□□□□ -1.09
CLP1Q08685 EMC3YKL207W 762 nt8.25□□□□□ -1.09
CLP1Q08685 CYT1YOR065W 930 nt8.25□□□□□ -1.09
CLP1Q08685 PAU21YOR394W 495 nt8.25□□□□□ -1.09
CLP1Q08685 LSP1YPL004C 1026 nt8.25□□□□□ -1.09
CLP1Q08685 PAU22YPL282C 495 nt8.25□□□□□ -1.09
CLP1Q08685 MEX67YPL169C 1800 nt8.24□□□□□ -1.09
CLP1Q08685 RPL12BYDR418W 498 nt8.24□□□□□ -1.09
CLP1Q08685 YFR020WYFR020W 699 nt8.24□□□□□ -1.09
CLP1Q08685 YLR460CYLR460C 1131 nt8.24□□□□□ -1.09
CLP1Q08685 YHR218WYHR218W 1812 nt8.24□□□□□ -1.09
CLP1Q08685 GAS1YMR307W 1680 nt8.23□□□□□ -1.09
CLP1Q08685 PTC6YCR079W 1329 nt8.23□□□□□ -1.09
CLP1Q08685 NDE1YMR145C 1683 nt8.22□□□□□ -1.09
CLP1Q08685 SAN1YDR143C 1833 nt8.22□□□□□ -1.09
CLP1Q08685 CCR4YAL021C 2514 nt8.21□□□□□ -1.1
CLP1Q08685 SBP1YHL034C 885 nt8.21□□□□□ -1.1
CLP1Q08685 YMR166CYMR166C 1107 nt8.21□□□□□ -1.1
CLP1Q08685 KGD2YDR148C 1392 nt8.21□□□□□ -1.1
CLP1Q08685 YMR210WYMR210W 1350 nt8.21□□□□□ -1.1
CLP1Q08685 YJL160CYJL160C 864 nt8.2□□□□□ -1.1
CLP1Q08685 MDM35YKL053C-A 261 nt8.2□□□□□ -1.1
CLP1Q08685 CWP2YKL096W-A 279 nt8.19□□□□□ -1.1
CLP1Q08685 MFT1YML062C 1179 nt8.18□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 25.9 ms