Protein–RNA interactions for Protein: Q08471

MSA1, G1-specific transcription factors activator MSA1, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSA1Q08471 YKL133CYKL133C 1392 nt6.81□□□□□ -1.32
MSA1Q08471 TAT2YOL020W 1779 nt6.8□□□□□ -1.32
MSA1Q08471 YDR455CYDR455C 309 nt6.8□□□□□ -1.32
MSA1Q08471 SPP2YOR148C 558 nt6.78□□□□□ -1.32
MSA1Q08471 YHR219WYHR219W 1875 nt6.78□□□□□ -1.32
MSA1Q08471 DIG1YPL049C 1359 nt6.78□□□□□ -1.32
MSA1Q08471 VPS62YGR141W 1404 nt6.77□□□□□ -1.33
MSA1Q08471 NBA1YOL070C 1506 nt6.77□□□□□ -1.33
MSA1Q08471 GNP1YDR508C 1992 nt6.77□□□□□ -1.33
MSA1Q08471 FRA1YLL029W 2250 nt6.77□□□□□ -1.33
MSA1Q08471 SRP102YKL154W 735 nt6.77□□□□□ -1.33
MSA1Q08471 ASP3-1YLR155C 1089 nt6.77□□□□□ -1.33
MSA1Q08471 ASP3-2YLR157C 1089 nt6.77□□□□□ -1.33
MSA1Q08471 ASP3-3YLR158C 1089 nt6.77□□□□□ -1.33
MSA1Q08471 ASP3-4YLR160C 1089 nt6.77□□□□□ -1.33
MSA1Q08471 TOS1YBR162C 1368 nt6.77□□□□□ -1.33
MSA1Q08471 ERG13YML126C 1476 nt6.77□□□□□ -1.33
MSA1Q08471 YDR306CYDR306C 1437 nt6.76□□□□□ -1.33
MSA1Q08471 EDC2YER035W 438 nt6.76□□□□□ -1.33
MSA1Q08471 AGP3YFL055W 1677 nt6.75□□□□□ -1.33
MSA1Q08471 OPI3YJR073C 621 nt6.75□□□□□ -1.33
MSA1Q08471 YDL086WYDL086W 822 nt6.74□□□□□ -1.33
MSA1Q08471 TGA1tA(UGC)A 73 nt6.74□□□□□ -1.33
MSA1Q08471 tA(UGC)EtA(UGC)E 73 nt6.74□□□□□ -1.33
MSA1Q08471 tA(UGC)GtA(UGC)G 73 nt6.74□□□□□ -1.33
MSA1Q08471 tA(UGC)LtA(UGC)L 73 nt6.74□□□□□ -1.33
MSA1Q08471 tA(UGC)OtA(UGC)O 73 nt6.74□□□□□ -1.33
MSA1Q08471 YGR210CYGR210C 1236 nt6.74□□□□□ -1.33
MSA1Q08471 CWP2YKL096W-A 279 nt6.74□□□□□ -1.33
MSA1Q08471 YRF1-2YER190W 5046 nt6.74□□□□□ -1.33
MSA1Q08471 ENO2YHR174W 1314 nt6.73□□□□□ -1.33
MSA1Q08471 HOG1YLR113W 1308 nt6.73□□□□□ -1.33
MSA1Q08471 AMF1YOR378W 1548 nt6.72□□□□□ -1.33
MSA1Q08471 MRP1YDR347W 966 nt6.72□□□□□ -1.33
MSA1Q08471 TPC1YGR096W 945 nt6.72□□□□□ -1.33
MSA1Q08471 YKR012CYKR012C 378 nt6.72□□□□□ -1.33
MSA1Q08471 PUS7YOR243C 2031 nt6.72□□□□□ -1.33
MSA1Q08471 ERO1YML130C 1692 nt6.71□□□□□ -1.33
MSA1Q08471 FCY1YPR062W 477 nt6.71□□□□□ -1.34
MSA1Q08471 TPN1YGL186C 1740 nt6.7□□□□□ -1.34
MSA1Q08471 TOM71YHR117W 1920 nt6.7□□□□□ -1.34
MSA1Q08471 SDS24YBR214W 1584 nt6.7□□□□□ -1.34
MSA1Q08471 EMC3YKL207W 762 nt6.7□□□□□ -1.34
MSA1Q08471 YMR206WYMR206W 942 nt6.7□□□□□ -1.34
MSA1Q08471 LEU2YCL018W 1095 nt6.7□□□□□ -1.34
MSA1Q08471 YJL160CYJL160C 864 nt6.69□□□□□ -1.34
MSA1Q08471 YLR280CYLR280C 351 nt6.69□□□□□ -1.34
MSA1Q08471 ENO1YGR254W 1314 nt6.69□□□□□ -1.34
MSA1Q08471 ALR1YOL130W 2580 nt6.68□□□□□ -1.34
MSA1Q08471 YPL108WYPL108W 507 nt6.68□□□□□ -1.34
MSA1Q08471 tD(GUC)BtD(GUC)B 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)DtD(GUC)D 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)G1tD(GUC)G1 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)G2tD(GUC)G2 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)I1tD(GUC)I1 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)I2tD(GUC)I2 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)J1tD(GUC)J1 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)J2tD(GUC)J2 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)J3tD(GUC)J3 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)J4tD(GUC)J4 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)KtD(GUC)K 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)L1tD(GUC)L1 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)L2tD(GUC)L2 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)MtD(GUC)M 72 nt6.67□□□□□ -1.34
MSA1Q08471 tD(GUC)OtD(GUC)O 72 nt6.67□□□□□ -1.34
MSA1Q08471 FIT1YDR534C 1587 nt6.66□□□□□ -1.34
MSA1Q08471 SAC7YDR389W 1965 nt6.66□□□□□ -1.34
MSA1Q08471 UFD1YGR048W 1086 nt6.66□□□□□ -1.34
MSA1Q08471 LSR1LSR1 1175 nt6.66□□□□□ -1.34
MSA1Q08471 MIM1YOL026C 342 nt6.66□□□□□ -1.34
MSA1Q08471 SFL1YOR140W 2301 nt6.66□□□□□ -1.34
MSA1Q08471 FET5YFL041W 1869 nt6.66□□□□□ -1.34
MSA1Q08471 NAM8YHR086W 1572 nt6.65□□□□□ -1.35
MSA1Q08471 RIM2YBR192W 1134 nt6.64□□□□□ -1.35
MSA1Q08471 VBA3YCL069W 1377 nt6.64□□□□□ -1.35
MSA1Q08471 YMR210WYMR210W 1350 nt6.64□□□□□ -1.35
MSA1Q08471 DLD3YEL071W 1491 nt6.63□□□□□ -1.35
MSA1Q08471 tL(UAA)B1tL(UAA)B1 84 nt6.63□□□□□ -1.35
MSA1Q08471 tL(UAA)B2tL(UAA)B2 84 nt6.63□□□□□ -1.35
MSA1Q08471 tL(UAA)DtL(UAA)D 84 nt6.63□□□□□ -1.35
MSA1Q08471 SUP51tL(UAA)J 84 nt6.63□□□□□ -1.35
MSA1Q08471 tL(UAA)KtL(UAA)K 84 nt6.63□□□□□ -1.35
MSA1Q08471 tL(UAA)LtL(UAA)L 84 nt6.63□□□□□ -1.35
MSA1Q08471 tL(UAA)NtL(UAA)N 84 nt6.63□□□□□ -1.35
MSA1Q08471 RPD3YNL330C 1302 nt6.63□□□□□ -1.35
MSA1Q08471 YNR064CYNR064C 873 nt6.63□□□□□ -1.35
MSA1Q08471 GDH1YOR375C 1365 nt6.63□□□□□ -1.35
MSA1Q08471 HBS1YKR084C 1836 nt6.62□□□□□ -1.35
MSA1Q08471 LPD1YFL018C 1500 nt6.61□□□□□ -1.35
MSA1Q08471 DUR3YHL016C 2208 nt6.61□□□□□ -1.35
MSA1Q08471 AIM1YAL046C 357 nt6.61□□□□□ -1.35
MSA1Q08471 KAE1YKR038C 1161 nt6.61□□□□□ -1.35
MSA1Q08471 ENT4YLL038C 744 nt6.61□□□□□ -1.35
MSA1Q08471 REX2YLR059C 810 nt6.59□□□□□ -1.35
MSA1Q08471 DUS3YLR401C 2007 nt6.59□□□□□ -1.36
MSA1Q08471 NSG2YNL156C 900 nt6.58□□□□□ -1.36
MSA1Q08471 DPL1YDR294C 1770 nt6.58□□□□□ -1.36
MSA1Q08471 BAP3YDR046C 1815 nt6.57□□□□□ -1.36
MSA1Q08471 ADA2YDR448W 1305 nt6.57□□□□□ -1.36
MSA1Q08471 PRE5YMR314W 705 nt6.57□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 95.3 ms