Protein–RNA interactions for Protein: Q07887

LDB18, Protein LDB18, yeastyeast

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB18Q07887 CYC3YAL039C 810 nt8.43□□□□□ -1.06
LDB18Q07887 RIM2YBR192W 1134 nt8.43□□□□□ -1.06
LDB18Q07887 SAN1YDR143C 1833 nt8.42□□□□□ -1.06
LDB18Q07887 KGD2YDR148C 1392 nt8.41□□□□□ -1.06
LDB18Q07887 ENO1YGR254W 1314 nt8.41□□□□□ -1.06
LDB18Q07887 MDM35YKL053C-A 261 nt8.41□□□□□ -1.06
LDB18Q07887 YPT11YNL304W 1254 nt8.4□□□□□ -1.06
LDB18Q07887 VBA3YCL069W 1377 nt8.39□□□□□ -1.07
LDB18Q07887 YCP4YCR004C 744 nt8.39□□□□□ -1.07
LDB18Q07887 DTR1YBR180W 1719 nt8.39□□□□□ -1.07
LDB18Q07887 RFC1YOR217W 2586 nt8.39□□□□□ -1.07
LDB18Q07887 YMR209CYMR209C 1374 nt8.38□□□□□ -1.07
LDB18Q07887 URA8YJR103W 1737 nt8.38□□□□□ -1.07
LDB18Q07887 SBP1YHL034C 885 nt8.38□□□□□ -1.07
LDB18Q07887 GTB1YDR221W 2109 nt8.38□□□□□ -1.07
LDB18Q07887 DPL1YDR294C 1770 nt8.37□□□□□ -1.07
LDB18Q07887 SRP102YKL154W 735 nt8.36□□□□□ -1.07
LDB18Q07887 DMA2YNL116W 1569 nt8.35□□□□□ -1.07
LDB18Q07887 GAS1YMR307W 1680 nt8.35□□□□□ -1.07
LDB18Q07887 SAM50YNL026W 1455 nt8.35□□□□□ -1.07
LDB18Q07887 SER2YGR208W 930 nt8.35□□□□□ -1.07
LDB18Q07887 LYS20YDL182W 1287 nt8.34□□□□□ -1.07
LDB18Q07887 PTC6YCR079W 1329 nt8.33□□□□□ -1.08
LDB18Q07887 YLR280CYLR280C 351 nt8.33□□□□□ -1.08
LDB18Q07887 HTS1YPR033C 1641 nt8.32□□□□□ -1.08
LDB18Q07887 RSM7YJR113C 744 nt8.32□□□□□ -1.08
LDB18Q07887 ERO1YML130C 1692 nt8.3□□□□□ -1.08
LDB18Q07887 YFR020WYFR020W 699 nt8.3□□□□□ -1.08
LDB18Q07887 GGA2YHR108W 1758 nt8.3□□□□□ -1.08
LDB18Q07887 SWM1YDR260C 513 nt8.29□□□□□ -1.08
LDB18Q07887 YDR467CYDR467C 327 nt8.29□□□□□ -1.08
LDB18Q07887 LEU4YNL104C 1860 nt8.28□□□□□ -1.08
LDB18Q07887 INH1YDL181W 258 nt8.28□□□□□ -1.08
LDB18Q07887 YIA6YIL006W 1122 nt8.28□□□□□ -1.08
LDB18Q07887 GPM1YKL152C 744 nt8.28□□□□□ -1.08
LDB18Q07887 CYT1YOR065W 930 nt8.28□□□□□ -1.08
LDB18Q07887 GAL2YLR081W 1725 nt8.28□□□□□ -1.08
LDB18Q07887 YGR210CYGR210C 1236 nt8.27□□□□□ -1.09
LDB18Q07887 YMR007WYMR007W 381 nt8.26□□□□□ -1.09
LDB18Q07887 YMR316C-BYMR316C-B 309 nt8.26□□□□□ -1.09
LDB18Q07887 THI3YDL080C 1830 nt8.26□□□□□ -1.09
LDB18Q07887 RIB1YBL033C 1038 nt8.25□□□□□ -1.09
LDB18Q07887 PSD1YNL169C 1503 nt8.24□□□□□ -1.09
LDB18Q07887 HXT10YFL011W 1641 nt8.24□□□□□ -1.09
LDB18Q07887 TGA1tA(UGC)A 73 nt8.23□□□□□ -1.09
LDB18Q07887 tA(UGC)EtA(UGC)E 73 nt8.23□□□□□ -1.09
LDB18Q07887 tA(UGC)GtA(UGC)G 73 nt8.23□□□□□ -1.09
LDB18Q07887 tA(UGC)LtA(UGC)L 73 nt8.23□□□□□ -1.09
LDB18Q07887 tA(UGC)OtA(UGC)O 73 nt8.23□□□□□ -1.09
LDB18Q07887 RCR1YBR005W 642 nt8.23□□□□□ -1.09
LDB18Q07887 tE(CUC)DtE(CUC)D 72 nt8.22□□□□□ -1.09
LDB18Q07887 tE(CUC)ItE(CUC)I 72 nt8.22□□□□□ -1.09
LDB18Q07887 YHR218WYHR218W 1812 nt8.22□□□□□ -1.09
LDB18Q07887 SOD2YHR008C 702 nt8.21□□□□□ -1.1
LDB18Q07887 YLR460CYLR460C 1131 nt8.21□□□□□ -1.1
LDB18Q07887 YBL095WYBL095W 813 nt8.21□□□□□ -1.1
LDB18Q07887 TOK1YJL093C 2076 nt8.21□□□□□ -1.1
LDB18Q07887 YPL108WYPL108W 507 nt8.2□□□□□ -1.1
LDB18Q07887 FCY1YPR062W 477 nt8.2□□□□□ -1.1
LDB18Q07887 AGP3YFL055W 1677 nt8.19□□□□□ -1.1
LDB18Q07887 YMC2YBR104W 990 nt8.19□□□□□ -1.1
LDB18Q07887 YRF1-3YGR296W 5580 nt8.18□□□□□ -1.1
LDB18Q07887 YRF1-6YNL339C 5580 nt8.18□□□□□ -1.1
LDB18Q07887 YRF1-7YPL283C 5580 nt8.18□□□□□ -1.1
LDB18Q07887 CHS7YHR142W 951 nt8.17□□□□□ -1.1
LDB18Q07887 YMR166CYMR166C 1107 nt8.17□□□□□ -1.1
LDB18Q07887 YIR035CYIR035C 765 nt8.16□□□□□ -1.1
LDB18Q07887 AAC3YBR085W 924 nt8.16□□□□□ -1.1
LDB18Q07887 NPP2YEL016C 1482 nt8.15□□□□□ -1.1
LDB18Q07887 TMS1YDR105C 1422 nt8.15□□□□□ -1.1
LDB18Q07887 MRS4YKR052C 915 nt8.15□□□□□ -1.1
LDB18Q07887 ERG6YML008C 1152 nt8.15□□□□□ -1.1
LDB18Q07887 OLA1YBR025C 1185 nt8.13□□□□□ -1.11
LDB18Q07887 LSP1YPL004C 1026 nt8.13□□□□□ -1.11
LDB18Q07887 MET22YOL064C 1074 nt8.12□□□□□ -1.11
LDB18Q07887 HEM14YER014W 1620 nt8.11□□□□□ -1.11
LDB18Q07887 RRT14YIL127C 621 nt8.11□□□□□ -1.11
LDB18Q07887 OCH1YGL038C 1443 nt8.11□□□□□ -1.11
LDB18Q07887 CAK1YFL029C 1107 nt8.1□□□□□ -1.11
LDB18Q07887 YIL177CYIL177C 5277 nt8.09□□□□□ -1.11
LDB18Q07887 TPN1YGL186C 1740 nt8.09□□□□□ -1.11
LDB18Q07887 YJL009WYJL009W 327 nt8.09□□□□□ -1.11
LDB18Q07887 YJL160CYJL160C 864 nt8.09□□□□□ -1.11
LDB18Q07887 YJR149WYJR149W 1215 nt8.09□□□□□ -1.11
LDB18Q07887 BUB2YMR055C 921 nt8.09□□□□□ -1.11
LDB18Q07887 AAT1YKL106W 1356 nt8.08□□□□□ -1.12
LDB18Q07887 PDC6YGR087C 1692 nt8.07□□□□□ -1.12
LDB18Q07887 POP2YNR052C 1302 nt8.05□□□□□ -1.12
LDB18Q07887 RNA170RNA170 169 nt8.05□□□□□ -1.12
LDB18Q07887 MTO1YGL236C 2010 nt8.05□□□□□ -1.12
LDB18Q07887 EMC3YKL207W 762 nt8.04□□□□□ -1.12
LDB18Q07887 YMR210WYMR210W 1350 nt8.04□□□□□ -1.12
LDB18Q07887 YBR056WYBR056W 1506 nt8.03□□□□□ -1.12
LDB18Q07887 snR86snR86 1004 nt8.02□□□□□ -1.13
LDB18Q07887 YER152W-AYER152W-A 567 nt8.02□□□□□ -1.13
LDB18Q07887 PET18YCR020C 648 nt8.01□□□□□ -1.13
LDB18Q07887 YPT31YER031C 672 nt8.01□□□□□ -1.13
LDB18Q07887 MFT1YML062C 1179 nt8.01□□□□□ -1.13
LDB18Q07887 YPR084WYPR084W 1371 nt8□□□□□ -1.13
LDB18Q07887 YER156CYER156C 1017 nt8□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 43.5 ms