Protein–RNA interactions for Protein: Q03691

ROT1, Protein ROT1, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROT1Q03691 RIB1YBL033C 1038 nt8.15□□□□□ -1.1
ROT1Q03691 UGP1YKL035W 1500 nt8.14□□□□□ -1.11
ROT1Q03691 UTP6YDR449C 1323 nt8.14□□□□□ -1.11
ROT1Q03691 YIA6YIL006W 1122 nt8.14□□□□□ -1.11
ROT1Q03691 CRC1YOR100C 984 nt8.14□□□□□ -1.11
ROT1Q03691 HAP5YOR358W 729 nt8.14□□□□□ -1.11
ROT1Q03691 YPL071CYPL071C 471 nt8.14□□□□□ -1.11
ROT1Q03691 VMA11YPL234C 495 nt8.14□□□□□ -1.11
ROT1Q03691 FRE6YLL051C 2139 nt8.14□□□□□ -1.11
ROT1Q03691 SWM1YDR260C 513 nt8.13□□□□□ -1.11
ROT1Q03691 SDS24YBR214W 1584 nt8.13□□□□□ -1.11
ROT1Q03691 SER2YGR208W 930 nt8.11□□□□□ -1.11
ROT1Q03691 SOD2YHR008C 702 nt8.11□□□□□ -1.11
ROT1Q03691 CYC3YAL039C 810 nt8.11□□□□□ -1.11
ROT1Q03691 snR31snR31 225 nt8.11□□□□□ -1.11
ROT1Q03691 REX2YLR059C 810 nt8.1□□□□□ -1.11
ROT1Q03691 SNX3YOR357C 489 nt8.1□□□□□ -1.11
ROT1Q03691 ERG6YML008C 1152 nt8.09□□□□□ -1.11
ROT1Q03691 VBA3YCL069W 1377 nt8.09□□□□□ -1.12
ROT1Q03691 RPN14YGL004C 1254 nt8.08□□□□□ -1.12
ROT1Q03691 RIM2YBR192W 1134 nt8.08□□□□□ -1.12
ROT1Q03691 SRP54YPR088C 1626 nt8.07□□□□□ -1.12
ROT1Q03691 RPD3YNL330C 1302 nt8.07□□□□□ -1.12
ROT1Q03691 SEM1YDR363W-A 270 nt8.07□□□□□ -1.12
ROT1Q03691 YTH1YPR107C 627 nt8.07□□□□□ -1.12
ROT1Q03691 SAN1YDR143C 1833 nt8.07□□□□□ -1.12
ROT1Q03691 ENO1YGR254W 1314 nt8.06□□□□□ -1.12
ROT1Q03691 HIS2YFR025C 1008 nt8.06□□□□□ -1.12
ROT1Q03691 HTS1YPR033C 1641 nt8.06□□□□□ -1.12
ROT1Q03691 TGA1tA(UGC)A 73 nt8.05□□□□□ -1.12
ROT1Q03691 tA(UGC)EtA(UGC)E 73 nt8.05□□□□□ -1.12
ROT1Q03691 tA(UGC)GtA(UGC)G 73 nt8.05□□□□□ -1.12
ROT1Q03691 tA(UGC)LtA(UGC)L 73 nt8.05□□□□□ -1.12
ROT1Q03691 tA(UGC)OtA(UGC)O 73 nt8.05□□□□□ -1.12
ROT1Q03691 YDR509WYDR509W 348 nt8.05□□□□□ -1.12
ROT1Q03691 SRP102YKL154W 735 nt8.05□□□□□ -1.12
ROT1Q03691 SSL2YIL143C 2532 nt8.05□□□□□ -1.12
ROT1Q03691 KGD2YDR148C 1392 nt8.05□□□□□ -1.12
ROT1Q03691 HSL7YBR133C 2484 nt8.04□□□□□ -1.12
ROT1Q03691 ERO1YML130C 1692 nt8.03□□□□□ -1.12
ROT1Q03691 YLR280CYLR280C 351 nt8.03□□□□□ -1.12
ROT1Q03691 YMR007WYMR007W 381 nt8.02□□□□□ -1.13
ROT1Q03691 YGR210CYGR210C 1236 nt8□□□□□ -1.13
ROT1Q03691 ODC1YPL134C 933 nt8□□□□□ -1.13
ROT1Q03691 BNS1YGR230W 414 nt7.99□□□□□ -1.13
ROT1Q03691 Q0144Q0144 330 nt7.99□□□□□ -1.13
ROT1Q03691 CWP2YKL096W-A 279 nt7.99□□□□□ -1.13
ROT1Q03691 POP2YNR052C 1302 nt7.99□□□□□ -1.13
ROT1Q03691 RPC31YNL151C 756 nt7.98□□□□□ -1.13
ROT1Q03691 YPT11YNL304W 1254 nt7.98□□□□□ -1.13
ROT1Q03691 YER152W-AYER152W-A 567 nt7.97□□□□□ -1.13
ROT1Q03691 FCY1YPR062W 477 nt7.97□□□□□ -1.13
ROT1Q03691 DPL1YDR294C 1770 nt7.97□□□□□ -1.13
ROT1Q03691 YFR020WYFR020W 699 nt7.96□□□□□ -1.14
ROT1Q03691 RCR1YBR005W 642 nt7.96□□□□□ -1.14
ROT1Q03691 PUS5YLR165C 765 nt7.95□□□□□ -1.14
ROT1Q03691 PTC6YCR079W 1329 nt7.95□□□□□ -1.14
ROT1Q03691 GAS1YMR307W 1680 nt7.95□□□□□ -1.14
ROT1Q03691 SBP1YHL034C 885 nt7.94□□□□□ -1.14
ROT1Q03691 SKG1YKR100C 1068 nt7.94□□□□□ -1.14
ROT1Q03691 YPL108WYPL108W 507 nt7.94□□□□□ -1.14
ROT1Q03691 RIM8YGL045W 1629 nt7.93□□□□□ -1.14
ROT1Q03691 KRR1YCL059C 951 nt7.93□□□□□ -1.14
ROT1Q03691 REC114YMR133W 1287 nt7.92□□□□□ -1.14
ROT1Q03691 FAF1YIL019W 1041 nt7.91□□□□□ -1.14
ROT1Q03691 FHN1YGR131W 525 nt7.9□□□□□ -1.14
ROT1Q03691 RSM7YJR113C 744 nt7.9□□□□□ -1.14
ROT1Q03691 ATG17YLR423C 1254 nt7.9□□□□□ -1.14
ROT1Q03691 YGL114WYGL114W 2178 nt7.89□□□□□ -1.15
ROT1Q03691 snR78snR78 87 nt7.89□□□□□ -1.15
ROT1Q03691 YJL160CYJL160C 864 nt7.89□□□□□ -1.15
ROT1Q03691 PET20YPL159C 762 nt7.89□□□□□ -1.15
ROT1Q03691 THI3YDL080C 1830 nt7.89□□□□□ -1.15
ROT1Q03691 YMR209CYMR209C 1374 nt7.88□□□□□ -1.15
ROT1Q03691 MDM35YKL053C-A 261 nt7.88□□□□□ -1.15
ROT1Q03691 YMR316C-BYMR316C-B 309 nt7.87□□□□□ -1.15
ROT1Q03691 YDR510C-AYDR510C-A 117 nt7.86□□□□□ -1.15
ROT1Q03691 YMR166CYMR166C 1107 nt7.86□□□□□ -1.15
ROT1Q03691 LEU4YNL104C 1860 nt7.85□□□□□ -1.15
ROT1Q03691 PET18YCR020C 648 nt7.85□□□□□ -1.15
ROT1Q03691 EMC3YKL207W 762 nt7.85□□□□□ -1.15
ROT1Q03691 BUD20YLR074C 501 nt7.85□□□□□ -1.15
ROT1Q03691 LSP1YPL004C 1026 nt7.85□□□□□ -1.15
ROT1Q03691 GGA2YHR108W 1758 nt7.84□□□□□ -1.15
ROT1Q03691 GPM1YKL152C 744 nt7.83□□□□□ -1.16
ROT1Q03691 YMR210WYMR210W 1350 nt7.83□□□□□ -1.16
ROT1Q03691 KDX1YKL161C 1302 nt7.82□□□□□ -1.16
ROT1Q03691 YDR467CYDR467C 327 nt7.82□□□□□ -1.16
ROT1Q03691 GRH1YDR517W 1119 nt7.82□□□□□ -1.16
ROT1Q03691 NAS6YGR232W 687 nt7.82□□□□□ -1.16
ROT1Q03691 YJL107CYJL107C 1164 nt7.81□□□□□ -1.16
ROT1Q03691 DMA2YNL116W 1569 nt7.8□□□□□ -1.16
ROT1Q03691 YLR460CYLR460C 1131 nt7.8□□□□□ -1.16
ROT1Q03691 CAK1YFL029C 1107 nt7.79□□□□□ -1.16
ROT1Q03691 AST1YBL069W 1290 nt7.79□□□□□ -1.16
ROT1Q03691 RSC4YKR008W 1878 nt7.79□□□□□ -1.16
ROT1Q03691 YCR099CYCR099C 468 nt7.78□□□□□ -1.16
ROT1Q03691 tE(CUC)DtE(CUC)D 72 nt7.78□□□□□ -1.16
ROT1Q03691 tE(CUC)ItE(CUC)I 72 nt7.78□□□□□ -1.16
ROT1Q03691 UTR5YEL035C 501 nt7.78□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 67.6 ms