Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trim43cP86449 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim43cP86449 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Trim43cP86449 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.29■■□□□ 1.8
Trim43cP86449 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim43cP86449 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim43cP86449 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Trim43cP86449 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.27■■□□□ 1.8
Trim43cP86449 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Trim43cP86449 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim43cP86449 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Trim43cP86449 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.25■■□□□ 1.79
Trim43cP86449 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim43cP86449 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim43cP86449 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim43cP86449 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim43cP86449 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim43cP86449 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim43cP86449 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Trim43cP86449 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.22■■□□□ 1.79
Trim43cP86449 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim43cP86449 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.21■■□□□ 1.79
Trim43cP86449 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Trim43cP86449 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim43cP86449 Gm30023-201ENSMUST00000197970 889 ntBASIC26.19■■□□□ 1.78
Trim43cP86449 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim43cP86449 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim43cP86449 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim43cP86449 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim43cP86449 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trim43cP86449 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Trim43cP86449 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trim43cP86449 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
Trim43cP86449 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Trim43cP86449 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.15■■□□□ 1.78
Trim43cP86449 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Trim43cP86449 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.14■■□□□ 1.77
Trim43cP86449 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trim43cP86449 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Trim43cP86449 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Trim43cP86449 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Trim43cP86449 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Trim43cP86449 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.12■■□□□ 1.77
Trim43cP86449 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim43cP86449 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.12■■□□□ 1.77
Trim43cP86449 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Trim43cP86449 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trim43cP86449 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim43cP86449 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim43cP86449 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim43cP86449 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Trim43cP86449 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.1■■□□□ 1.77
Trim43cP86449 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
Trim43cP86449 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.09■■□□□ 1.77
Trim43cP86449 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trim43cP86449 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Trim43cP86449 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim43cP86449 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trim43cP86449 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.07■■□□□ 1.76
Trim43cP86449 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trim43cP86449 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
Trim43cP86449 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim43cP86449 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim43cP86449 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim43cP86449 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim43cP86449 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim43cP86449 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim43cP86449 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim43cP86449 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Trim43cP86449 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trim43cP86449 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim43cP86449 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Trim43cP86449 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Trim43cP86449 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trim43cP86449 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Trim43cP86449 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trim43cP86449 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Trim43cP86449 Nkain2-201ENSMUST00000092602 558 ntBASIC25.99■■□□□ 1.75
Trim43cP86449 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trim43cP86449 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Trim43cP86449 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.98■■□□□ 1.75
Trim43cP86449 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.98■■□□□ 1.75
Trim43cP86449 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.96■■□□□ 1.75
Trim43cP86449 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.96■■□□□ 1.75
Trim43cP86449 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.96■■□□□ 1.75
Trim43cP86449 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trim43cP86449 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Trim43cP86449 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Trim43cP86449 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim43cP86449 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.94■■□□□ 1.74
Trim43cP86449 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Trim43cP86449 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim43cP86449 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim43cP86449 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim43cP86449 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trim43cP86449 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Trim43cP86449 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.92■■□□□ 1.74
Trim43cP86449 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Trim43cP86449 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
Trim43cP86449 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms