Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h3bP84228 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hist1h3bP84228 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hist1h3bP84228 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hist1h3bP84228 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h3bP84228 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h3bP84228 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hist1h3bP84228 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h3bP84228 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.92■□□□□ 0.94
Hist1h3bP84228 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hist1h3bP84228 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.91■□□□□ 0.94
Hist1h3bP84228 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.9■□□□□ 0.94
Hist1h3bP84228 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Hist1h3bP84228 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hist1h3bP84228 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hist1h3bP84228 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Hist1h3bP84228 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hist1h3bP84228 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hist1h3bP84228 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hist1h3bP84228 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hist1h3bP84228 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hist1h3bP84228 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hist1h3bP84228 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Hist1h3bP84228 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Hist1h3bP84228 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hist1h3bP84228 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hist1h3bP84228 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hist1h3bP84228 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hist1h3bP84228 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hist1h3bP84228 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hist1h3bP84228 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Hist1h3bP84228 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hist1h3bP84228 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hist1h3bP84228 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Hist1h3bP84228 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hist1h3bP84228 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hist1h3bP84228 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hist1h3bP84228 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hist1h3bP84228 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hist1h3bP84228 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hist1h3bP84228 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hist1h3bP84228 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hist1h3bP84228 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hist1h3bP84228 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hist1h3bP84228 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.78■□□□□ 0.92
Hist1h3bP84228 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Hist1h3bP84228 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hist1h3bP84228 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hist1h3bP84228 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.77■□□□□ 0.91
Hist1h3bP84228 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Hist1h3bP84228 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h3bP84228 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h3bP84228 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h3bP84228 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h3bP84228 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h3bP84228 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Hist1h3bP84228 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h3bP84228 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h3bP84228 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hist1h3bP84228 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hist1h3bP84228 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hist1h3bP84228 Gm30023-201ENSMUST00000197970 889 ntBASIC20.75■□□□□ 0.91
Hist1h3bP84228 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.75■□□□□ 0.91
Hist1h3bP84228 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Hist1h3bP84228 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hist1h3bP84228 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hist1h3bP84228 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.74■□□□□ 0.91
Hist1h3bP84228 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hist1h3bP84228 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hist1h3bP84228 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Hist1h3bP84228 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hist1h3bP84228 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hist1h3bP84228 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Hist1h3bP84228 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Hist1h3bP84228 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hist1h3bP84228 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hist1h3bP84228 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hist1h3bP84228 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hist1h3bP84228 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hist1h3bP84228 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hist1h3bP84228 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Hist1h3bP84228 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hist1h3bP84228 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hist1h3bP84228 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hist1h3bP84228 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hist1h3bP84228 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hist1h3bP84228 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.68■□□□□ 0.9
Hist1h3bP84228 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.67■□□□□ 0.9
Hist1h3bP84228 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.67■□□□□ 0.9
Hist1h3bP84228 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Hist1h3bP84228 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.66■□□□□ 0.9
Hist1h3bP84228 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h3bP84228 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h3bP84228 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.65■□□□□ 0.9
Hist1h3bP84228 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h3bP84228 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hist1h3bP84228 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hist1h3bP84228 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hist1h3bP84228 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hist1h3bP84228 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms