Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.67■■■□□ 2.66
CNTNAP1P78357 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CNTNAP1P78357 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC31.65■■■□□ 2.66
CNTNAP1P78357 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
CNTNAP1P78357 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.65■■■□□ 2.66
CNTNAP1P78357 AL033527.3-201ENST00000566366 1196 ntBASIC31.64■■■□□ 2.66
CNTNAP1P78357 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CNTNAP1P78357 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CNTNAP1P78357 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.63■■■□□ 2.65
CNTNAP1P78357 AC008813.1-201ENST00000536597 885 ntBASIC31.63■■■□□ 2.65
CNTNAP1P78357 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CNTNAP1P78357 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CNTNAP1P78357 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
CNTNAP1P78357 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CNTNAP1P78357 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
CNTNAP1P78357 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
CNTNAP1P78357 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CNTNAP1P78357 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.58■■■□□ 2.65
CNTNAP1P78357 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
CNTNAP1P78357 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CNTNAP1P78357 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CNTNAP1P78357 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.57■■■□□ 2.64
CNTNAP1P78357 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CNTNAP1P78357 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CNTNAP1P78357 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
CNTNAP1P78357 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CNTNAP1P78357 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CNTNAP1P78357 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
CNTNAP1P78357 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CNTNAP1P78357 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.52■■■□□ 2.64
CNTNAP1P78357 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.51■■■□□ 2.63
CNTNAP1P78357 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CNTNAP1P78357 AC019069.1-201ENST00000610008 1333 ntBASIC31.51■■■□□ 2.63
CNTNAP1P78357 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CNTNAP1P78357 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
CNTNAP1P78357 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.49■■■□□ 2.63
CNTNAP1P78357 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CNTNAP1P78357 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
CNTNAP1P78357 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CNTNAP1P78357 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CNTNAP1P78357 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CNTNAP1P78357 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
CNTNAP1P78357 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CNTNAP1P78357 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.44■■■□□ 2.62
CNTNAP1P78357 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CNTNAP1P78357 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CNTNAP1P78357 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CNTNAP1P78357 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.43■■■□□ 2.62
CNTNAP1P78357 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.42■■■□□ 2.62
CNTNAP1P78357 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.42■■■□□ 2.62
CNTNAP1P78357 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CNTNAP1P78357 RARRES2P1-201ENST00000474487 481 ntBASIC31.41■■■□□ 2.62
CNTNAP1P78357 AC022413.1-201ENST00000624602 984 ntBASIC31.41■■■□□ 2.62
CNTNAP1P78357 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CNTNAP1P78357 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CNTNAP1P78357 AL161658.1-201ENST00000623641 1967 ntBASIC31.4■■■□□ 2.62
CNTNAP1P78357 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CNTNAP1P78357 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CNTNAP1P78357 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CNTNAP1P78357 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.4■■■□□ 2.62
CNTNAP1P78357 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.4■■■□□ 2.62
CNTNAP1P78357 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CNTNAP1P78357 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CNTNAP1P78357 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.38■■■□□ 2.61
CNTNAP1P78357 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
CNTNAP1P78357 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CNTNAP1P78357 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
CNTNAP1P78357 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
CNTNAP1P78357 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.36■■■□□ 2.61
CNTNAP1P78357 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.36■■■□□ 2.61
CNTNAP1P78357 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.36■■■□□ 2.61
CNTNAP1P78357 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CNTNAP1P78357 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.36■■■□□ 2.61
CNTNAP1P78357 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CNTNAP1P78357 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.34■■■□□ 2.61
CNTNAP1P78357 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CNTNAP1P78357 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.34■■■□□ 2.61
CNTNAP1P78357 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CNTNAP1P78357 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
CNTNAP1P78357 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CNTNAP1P78357 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CNTNAP1P78357 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.32■■■□□ 2.6
CNTNAP1P78357 U85056.1-201ENST00000616429 682 ntBASIC31.31■■■□□ 2.6
CNTNAP1P78357 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CNTNAP1P78357 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CNTNAP1P78357 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.31■■■□□ 2.6
CNTNAP1P78357 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.3■■■□□ 2.6
CNTNAP1P78357 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CNTNAP1P78357 TSPY13P-201ENST00000338964 914 ntBASIC31.29■■■□□ 2.6
CNTNAP1P78357 AL592295.1-201ENST00000400984 884 ntBASIC31.29■■■□□ 2.6
CNTNAP1P78357 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
CNTNAP1P78357 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CNTNAP1P78357 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.28■■■□□ 2.6
CNTNAP1P78357 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.28■■■□□ 2.6
CNTNAP1P78357 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CNTNAP1P78357 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CNTNAP1P78357 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.25■■■□□ 2.59
CNTNAP1P78357 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
CNTNAP1P78357 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CNTNAP1P78357 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms