Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.79■□□□□ 0.76
Lmo4P61969 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lmo4P61969 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmo4P61969 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmo4P61969 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmo4P61969 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.78■□□□□ 0.76
Lmo4P61969 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lmo4P61969 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmo4P61969 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lmo4P61969 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.76■□□□□ 0.75
Lmo4P61969 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lmo4P61969 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lmo4P61969 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lmo4P61969 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Lmo4P61969 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lmo4P61969 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lmo4P61969 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Lmo4P61969 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.71■□□□□ 0.75
Lmo4P61969 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.71■□□□□ 0.75
Lmo4P61969 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmo4P61969 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lmo4P61969 Zxda-201ENSMUST00000117281 2621 ntBASIC19.71■□□□□ 0.75
Lmo4P61969 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Lmo4P61969 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.7■□□□□ 0.74
Lmo4P61969 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.7■□□□□ 0.74
Lmo4P61969 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.7■□□□□ 0.74
Lmo4P61969 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lmo4P61969 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lmo4P61969 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.69■□□□□ 0.74
Lmo4P61969 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lmo4P61969 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lmo4P61969 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lmo4P61969 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lmo4P61969 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lmo4P61969 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lmo4P61969 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Lmo4P61969 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmo4P61969 Particl-201ENSMUST00000205370 1560 ntBASIC19.66■□□□□ 0.74
Lmo4P61969 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lmo4P61969 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.66■□□□□ 0.74
Lmo4P61969 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.65■□□□□ 0.74
Lmo4P61969 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lmo4P61969 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lmo4P61969 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lmo4P61969 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Lmo4P61969 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lmo4P61969 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lmo4P61969 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.62■□□□□ 0.73
Lmo4P61969 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lmo4P61969 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lmo4P61969 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Lmo4P61969 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lmo4P61969 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Lmo4P61969 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lmo4P61969 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lmo4P61969 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmo4P61969 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lmo4P61969 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lmo4P61969 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lmo4P61969 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lmo4P61969 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lmo4P61969 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lmo4P61969 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.56■□□□□ 0.72
Lmo4P61969 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.56■□□□□ 0.72
Lmo4P61969 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lmo4P61969 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lmo4P61969 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lmo4P61969 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lmo4P61969 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lmo4P61969 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Lmo4P61969 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lmo4P61969 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.55■□□□□ 0.72
Lmo4P61969 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lmo4P61969 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lmo4P61969 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lmo4P61969 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.53■□□□□ 0.72
Lmo4P61969 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lmo4P61969 Gm11175-201ENSMUST00000116172 543 ntBASIC19.53■□□□□ 0.72
Lmo4P61969 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lmo4P61969 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Lmo4P61969 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Lmo4P61969 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lmo4P61969 Gm6311-201ENSMUST00000073790 878 ntBASIC19.51■□□□□ 0.71
Lmo4P61969 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Lmo4P61969 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Lmo4P61969 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Lmo4P61969 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.48■□□□□ 0.71
Lmo4P61969 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lmo4P61969 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lmo4P61969 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.48■□□□□ 0.71
Lmo4P61969 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lmo4P61969 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.47■□□□□ 0.71
Lmo4P61969 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lmo4P61969 Mir6538-201ENSMUST00000183713 110 ntBASIC19.47■□□□□ 0.71
Lmo4P61969 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Lmo4P61969 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lmo4P61969 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lmo4P61969 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lmo4P61969 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lmo4P61969 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 120.6 ms