Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
Cks2P56390 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cks2P56390 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cks2P56390 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cks2P56390 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cks2P56390 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cks2P56390 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.86■□□□□ 0.77
Cks2P56390 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cks2P56390 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cks2P56390 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cks2P56390 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cks2P56390 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cks2P56390 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cks2P56390 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cks2P56390 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cks2P56390 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.82■□□□□ 0.76
Cks2P56390 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Cks2P56390 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cks2P56390 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cks2P56390 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.81■□□□□ 0.76
Cks2P56390 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cks2P56390 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cks2P56390 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cks2P56390 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.8■□□□□ 0.76
Cks2P56390 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cks2P56390 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cks2P56390 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cks2P56390 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cks2P56390 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cks2P56390 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cks2P56390 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cks2P56390 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cks2P56390 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cks2P56390 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Cks2P56390 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Cks2P56390 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cks2P56390 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cks2P56390 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cks2P56390 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cks2P56390 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cks2P56390 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cks2P56390 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cks2P56390 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cks2P56390 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cks2P56390 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cks2P56390 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cks2P56390 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cks2P56390 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cks2P56390 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cks2P56390 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Cks2P56390 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cks2P56390 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Cks2P56390 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cks2P56390 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cks2P56390 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cks2P56390 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cks2P56390 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Cks2P56390 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.67■□□□□ 0.74
Cks2P56390 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cks2P56390 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cks2P56390 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cks2P56390 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cks2P56390 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cks2P56390 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cks2P56390 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cks2P56390 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cks2P56390 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cks2P56390 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Cks2P56390 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cks2P56390 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cks2P56390 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cks2P56390 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cks2P56390 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cks2P56390 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cks2P56390 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cks2P56390 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.63■□□□□ 0.73
Cks2P56390 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cks2P56390 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cks2P56390 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cks2P56390 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cks2P56390 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cks2P56390 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cks2P56390 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cks2P56390 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cks2P56390 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cks2P56390 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cks2P56390 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cks2P56390 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cks2P56390 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cks2P56390 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cks2P56390 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cks2P56390 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cks2P56390 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Cks2P56390 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.58■□□□□ 0.72
Cks2P56390 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cks2P56390 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.58■□□□□ 0.72
Cks2P56390 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cks2P56390 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cks2P56390 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cks2P56390 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms