Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.05■□□□□ 0.64
APOC4P55056 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.05■□□□□ 0.64
APOC4P55056 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APOC4P55056 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
APOC4P55056 MIR3648-2-201ENST00000581792 180 ntBASIC19.04■□□□□ 0.64
APOC4P55056 MIR3648-1-201ENST00000615959 180 ntBASIC19.04■□□□□ 0.64
APOC4P55056 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.03■□□□□ 0.64
APOC4P55056 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOC4P55056 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.03■□□□□ 0.64
APOC4P55056 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOC4P55056 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
APOC4P55056 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.02■□□□□ 0.64
APOC4P55056 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
APOC4P55056 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
APOC4P55056 DUX4L13-201ENST00000554103 1267 ntBASIC19.02■□□□□ 0.64
APOC4P55056 DUX4L15-201ENST00000611059 1267 ntBASIC19.02■□□□□ 0.64
APOC4P55056 DUX4L23-201ENST00000615195 1269 ntBASIC19.02■□□□□ 0.64
APOC4P55056 DUX4L24-201ENST00000617576 1269 ntBASIC19.02■□□□□ 0.64
APOC4P55056 DUX4L22-201ENST00000618238 1269 ntBASIC19.02■□□□□ 0.64
APOC4P55056 DUX4L20-201ENST00000619712 1269 ntBASIC19.02■□□□□ 0.64
APOC4P55056 DUX4L21-201ENST00000622058 1269 ntBASIC19.02■□□□□ 0.64
APOC4P55056 DUX4L10-201ENST00000622460 1267 ntBASIC19.02■□□□□ 0.64
APOC4P55056 DUX4L25-201ENST00000624915 1269 ntBASIC19.02■□□□□ 0.64
APOC4P55056 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.01■□□□□ 0.63
APOC4P55056 MIR639-201ENST00000384974 98 ntBASIC19.01■□□□□ 0.63
APOC4P55056 AC016575.1-201ENST00000607026 382 ntBASIC19.01■□□□□ 0.63
APOC4P55056 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOC4P55056 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.01■□□□□ 0.63
APOC4P55056 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19■□□□□ 0.63
APOC4P55056 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOC4P55056 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
APOC4P55056 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19■□□□□ 0.63
APOC4P55056 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
APOC4P55056 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19■□□□□ 0.63
APOC4P55056 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOC4P55056 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
APOC4P55056 AC127502.1-201ENST00000399971 1502 ntBASIC19■□□□□ 0.63
APOC4P55056 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC4P55056 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC4P55056 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC4P55056 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC4P55056 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC4P55056 CR559946.2-201ENST00000623684 991 ntBASIC18.99■□□□□ 0.63
APOC4P55056 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.99■□□□□ 0.63
APOC4P55056 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC4P55056 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC4P55056 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOC4P55056 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOC4P55056 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
APOC4P55056 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOC4P55056 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOC4P55056 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOC4P55056 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.96■□□□□ 0.63
APOC4P55056 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
APOC4P55056 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOC4P55056 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
APOC4P55056 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
APOC4P55056 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
APOC4P55056 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.94■□□□□ 0.62
APOC4P55056 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.94■□□□□ 0.62
APOC4P55056 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
APOC4P55056 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.93■□□□□ 0.62
APOC4P55056 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.93■□□□□ 0.62
APOC4P55056 MIR4449-201ENST00000578365 66 ntBASIC18.93■□□□□ 0.62
APOC4P55056 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.93■□□□□ 0.62
APOC4P55056 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.93■□□□□ 0.62
APOC4P55056 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOC4P55056 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
APOC4P55056 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOC4P55056 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
APOC4P55056 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
APOC4P55056 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOC4P55056 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOC4P55056 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOC4P55056 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
APOC4P55056 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
APOC4P55056 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOC4P55056 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.91■□□□□ 0.62
APOC4P55056 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
APOC4P55056 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.91■□□□□ 0.62
APOC4P55056 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOC4P55056 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
APOC4P55056 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.9■□□□□ 0.62
APOC4P55056 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
APOC4P55056 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
APOC4P55056 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
APOC4P55056 AC135983.2-203ENST00000454486 1613 ntBASIC18.87■□□□□ 0.61
APOC4P55056 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
APOC4P55056 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.86■□□□□ 0.61
APOC4P55056 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.86■□□□□ 0.61
APOC4P55056 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC4P55056 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
APOC4P55056 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC4P55056 ST7-AS1-201ENST00000456775 1889 ntBASIC18.86■□□□□ 0.61
APOC4P55056 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
APOC4P55056 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
APOC4P55056 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
APOC4P55056 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.85■□□□□ 0.61
APOC4P55056 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
APOC4P55056 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms