Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRRX1P54821 MIR6090-201ENST00000622481 60 ntBASIC21.22■□□□□ 0.99
PRRX1P54821 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRRX1P54821 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRRX1P54821 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRRX1P54821 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRRX1P54821 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRRX1P54821 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRRX1P54821 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRRX1P54821 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRRX1P54821 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRRX1P54821 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PRRX1P54821 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRRX1P54821 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRRX1P54821 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRRX1P54821 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRRX1P54821 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRRX1P54821 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRRX1P54821 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRRX1P54821 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.19■□□□□ 0.98
PRRX1P54821 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRRX1P54821 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.18■□□□□ 0.98
PRRX1P54821 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRRX1P54821 AC127502.1-201ENST00000399971 1502 ntBASIC21.18■□□□□ 0.98
PRRX1P54821 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
PRRX1P54821 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRRX1P54821 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PRRX1P54821 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PRRX1P54821 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRRX1P54821 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRRX1P54821 ABCB10P3-201ENST00000561950 2166 ntBASIC21.15■□□□□ 0.98
PRRX1P54821 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRRX1P54821 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.15■□□□□ 0.98
PRRX1P54821 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRRX1P54821 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRRX1P54821 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.14■□□□□ 0.98
PRRX1P54821 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRRX1P54821 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRRX1P54821 AC139426.1-201ENST00000568218 2529 ntBASIC21.14■□□□□ 0.97
PRRX1P54821 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PRRX1P54821 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.13■□□□□ 0.97
PRRX1P54821 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRRX1P54821 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRRX1P54821 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRRX1P54821 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PRRX1P54821 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRRX1P54821 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRRX1P54821 DUX4L29-201ENST00000425409 679 ntBASIC21.1■□□□□ 0.97
PRRX1P54821 AL139393.2-201ENST00000608721 2025 ntBASIC21.1■□□□□ 0.97
PRRX1P54821 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRRX1P54821 AP004833.2-201ENST00000532228 1454 ntBASIC21.09■□□□□ 0.97
PRRX1P54821 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PRRX1P54821 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRRX1P54821 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PRRX1P54821 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.09■□□□□ 0.97
PRRX1P54821 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PRRX1P54821 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PRRX1P54821 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.08■□□□□ 0.97
PRRX1P54821 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRRX1P54821 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRRX1P54821 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRRX1P54821 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRRX1P54821 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRRX1P54821 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRRX1P54821 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRRX1P54821 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRRX1P54821 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
PRRX1P54821 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRRX1P54821 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PRRX1P54821 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRRX1P54821 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PRRX1P54821 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRRX1P54821 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRRX1P54821 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRRX1P54821 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.01■□□□□ 0.95
PRRX1P54821 AC021231.2-201ENST00000594613 730 ntBASIC21.01■□□□□ 0.95
PRRX1P54821 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRRX1P54821 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRRX1P54821 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.01■□□□□ 0.95
PRRX1P54821 LINC00273-201ENST00000539813 1452 ntBASIC21.01■□□□□ 0.95
PRRX1P54821 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRRX1P54821 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRRX1P54821 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21■□□□□ 0.95
PRRX1P54821 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21■□□□□ 0.95
PRRX1P54821 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRRX1P54821 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21■□□□□ 0.95
PRRX1P54821 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21■□□□□ 0.95
PRRX1P54821 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRRX1P54821 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.99■□□□□ 0.95
PRRX1P54821 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
PRRX1P54821 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRRX1P54821 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.99■□□□□ 0.95
PRRX1P54821 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.99■□□□□ 0.95
PRRX1P54821 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRRX1P54821 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRRX1P54821 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.98■□□□□ 0.95
PRRX1P54821 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRRX1P54821 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRRX1P54821 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PRRX1P54821 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms