Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Nub1P54729 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Nub1P54729 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Nub1P54729 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.71■■□□□ 1.71
Nub1P54729 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Nub1P54729 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Nub1P54729 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
Nub1P54729 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Nub1P54729 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.68■■□□□ 1.7
Nub1P54729 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.68■■□□□ 1.7
Nub1P54729 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Nub1P54729 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.67■■□□□ 1.7
Nub1P54729 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Nub1P54729 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Nub1P54729 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.67■■□□□ 1.7
Nub1P54729 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.66■■□□□ 1.7
Nub1P54729 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.65■■□□□ 1.7
Nub1P54729 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Nub1P54729 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Nub1P54729 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Nub1P54729 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Nub1P54729 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Nub1P54729 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.62■■□□□ 1.69
Nub1P54729 Gm30023-201ENSMUST00000197970 889 ntBASIC25.62■■□□□ 1.69
Nub1P54729 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
Nub1P54729 Nkain2-201ENSMUST00000092602 558 ntBASIC25.62■■□□□ 1.69
Nub1P54729 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Nub1P54729 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.61■■□□□ 1.69
Nub1P54729 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Nub1P54729 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nub1P54729 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nub1P54729 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nub1P54729 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
Nub1P54729 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Nub1P54729 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nub1P54729 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nub1P54729 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nub1P54729 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Nub1P54729 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.58■■□□□ 1.69
Nub1P54729 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Nub1P54729 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Nub1P54729 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Nub1P54729 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nub1P54729 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Nub1P54729 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nub1P54729 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nub1P54729 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Nub1P54729 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Nub1P54729 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.53■■□□□ 1.68
Nub1P54729 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Nub1P54729 Gm6821-201ENSMUST00000107540 542 ntBASIC25.53■■□□□ 1.68
Nub1P54729 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Nub1P54729 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
Nub1P54729 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Nub1P54729 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.68
Nub1P54729 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Nub1P54729 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.51■■□□□ 1.67
Nub1P54729 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Nub1P54729 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Nub1P54729 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Nub1P54729 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Nub1P54729 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Nub1P54729 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
Nub1P54729 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Nub1P54729 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Nub1P54729 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Nub1P54729 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.48■■□□□ 1.67
Nub1P54729 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Nub1P54729 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Nub1P54729 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Nub1P54729 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Nub1P54729 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Nub1P54729 Gm8503-201ENSMUST00000118131 455 ntBASIC25.46■■□□□ 1.67
Nub1P54729 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Nub1P54729 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Nub1P54729 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Nub1P54729 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Nub1P54729 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Nub1P54729 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Nub1P54729 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Nub1P54729 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
Nub1P54729 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Nub1P54729 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Nub1P54729 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.43■■□□□ 1.66
Nub1P54729 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.43■■□□□ 1.66
Nub1P54729 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Nub1P54729 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Nub1P54729 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Nub1P54729 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Nub1P54729 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Nub1P54729 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.42■■□□□ 1.66
Nub1P54729 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Nub1P54729 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.41■■□□□ 1.66
Nub1P54729 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Nub1P54729 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.4■■□□□ 1.66
Nub1P54729 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Nub1P54729 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.39■■□□□ 1.65
Nub1P54729 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Nub1P54729 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Nub1P54729 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms