Protein–RNA interactions for Protein: P53622

COP1, Coatomer subunit alpha, yeastyeast

Known RBP Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
COP1P53622 NAM8YHR086W 1572 nt8.66□□□□□ -1.02
COP1P53622 YMR265CYMR265C 1386 nt8.66□□□□□ -1.02
COP1P53622 ADH3YMR083W 1128 nt8.66□□□□□ -1.02
COP1P53622 HAP5YOR358W 729 nt8.66□□□□□ -1.02
COP1P53622 PHB2YGR231C 933 nt8.65□□□□□ -1.02
COP1P53622 KRR1YCL059C 951 nt8.63□□□□□ -1.03
COP1P53622 LPD1YFL018C 1500 nt8.63□□□□□ -1.03
COP1P53622 YKL133CYKL133C 1392 nt8.62□□□□□ -1.03
COP1P53622 HEM14YER014W 1620 nt8.62□□□□□ -1.03
COP1P53622 ENO1YGR254W 1314 nt8.62□□□□□ -1.03
COP1P53622 RPD3YNL330C 1302 nt8.62□□□□□ -1.03
COP1P53622 UFD1YGR048W 1086 nt8.62□□□□□ -1.03
COP1P53622 SOD2YHR008C 702 nt8.62□□□□□ -1.03
COP1P53622 SUV3YPL029W 2214 nt8.61□□□□□ -1.03
COP1P53622 REX2YLR059C 810 nt8.61□□□□□ -1.03
COP1P53622 MET1YKR069W 1782 nt8.61□□□□□ -1.03
COP1P53622 SDS24YBR214W 1584 nt8.61□□□□□ -1.03
COP1P53622 YHR219WYHR219W 1875 nt8.6□□□□□ -1.03
COP1P53622 SER2YGR208W 930 nt8.6□□□□□ -1.03
COP1P53622 HTS1YPR033C 1641 nt8.6□□□□□ -1.03
COP1P53622 SFL1YOR140W 2301 nt8.59□□□□□ -1.03
COP1P53622 SRP102YKL154W 735 nt8.59□□□□□ -1.03
COP1P53622 YMR007WYMR007W 381 nt8.59□□□□□ -1.03
COP1P53622 RCR1YBR005W 642 nt8.59□□□□□ -1.03
COP1P53622 SNX3YOR357C 489 nt8.59□□□□□ -1.03
COP1P53622 SRP54YPR088C 1626 nt8.58□□□□□ -1.04
COP1P53622 YPT11YNL304W 1254 nt8.58□□□□□ -1.04
COP1P53622 LYS20YDL182W 1287 nt8.57□□□□□ -1.04
COP1P53622 SWM1YDR260C 513 nt8.57□□□□□ -1.04
COP1P53622 LSR1LSR1 1175 nt8.57□□□□□ -1.04
COP1P53622 ODC1YPL134C 933 nt8.57□□□□□ -1.04
COP1P53622 FRA1YLL029W 2250 nt8.57□□□□□ -1.04
COP1P53622 ZAP1YJL056C 2643 nt8.57□□□□□ -1.04
COP1P53622 MRS6YOR370C 1812 nt8.57□□□□□ -1.04
COP1P53622 CRC1YOR100C 984 nt8.56□□□□□ -1.04
COP1P53622 ERG6YML008C 1152 nt8.55□□□□□ -1.04
COP1P53622 VBA3YCL069W 1377 nt8.55□□□□□ -1.04
COP1P53622 ALR1YOL130W 2580 nt8.54□□□□□ -1.04
COP1P53622 YKL053WYKL053W 375 nt8.54□□□□□ -1.04
COP1P53622 CWP2YKL096W-A 279 nt8.54□□□□□ -1.04
COP1P53622 YLR280CYLR280C 351 nt8.53□□□□□ -1.04
COP1P53622 NME1NME1 340 nt8.53□□□□□ -1.04
COP1P53622 ERO1YML130C 1692 nt8.52□□□□□ -1.05
COP1P53622 RSM7YJR113C 744 nt8.51□□□□□ -1.05
COP1P53622 FIT1YDR534C 1587 nt8.51□□□□□ -1.05
COP1P53622 SAN1YDR143C 1833 nt8.5□□□□□ -1.05
COP1P53622 YRF1-3YGR296W 5580 nt8.5□□□□□ -1.05
COP1P53622 YRF1-6YNL339C 5580 nt8.5□□□□□ -1.05
COP1P53622 YRF1-7YPL283C 5580 nt8.5□□□□□ -1.05
COP1P53622 HXT10YFL011W 1641 nt8.49□□□□□ -1.05
COP1P53622 NBA1YOL070C 1506 nt8.49□□□□□ -1.05
COP1P53622 YGR210CYGR210C 1236 nt8.48□□□□□ -1.05
COP1P53622 SBP1YHL034C 885 nt8.48□□□□□ -1.05
COP1P53622 NSG2YNL156C 900 nt8.48□□□□□ -1.05
COP1P53622 RIM2YBR192W 1134 nt8.48□□□□□ -1.05
COP1P53622 YFR020WYFR020W 699 nt8.47□□□□□ -1.05
COP1P53622 KGD2YDR148C 1392 nt8.47□□□□□ -1.05
COP1P53622 RPC31YNL151C 756 nt8.46□□□□□ -1.06
COP1P53622 POP2YNR052C 1302 nt8.46□□□□□ -1.06
COP1P53622 SSL2YIL143C 2532 nt8.46□□□□□ -1.06
COP1P53622 GAS1YMR307W 1680 nt8.46□□□□□ -1.06
COP1P53622 YDR510C-AYDR510C-A 117 nt8.45□□□□□ -1.06
COP1P53622 TGA1tA(UGC)A 73 nt8.43□□□□□ -1.06
COP1P53622 tA(UGC)EtA(UGC)E 73 nt8.43□□□□□ -1.06
COP1P53622 tA(UGC)GtA(UGC)G 73 nt8.43□□□□□ -1.06
COP1P53622 tA(UGC)LtA(UGC)L 73 nt8.43□□□□□ -1.06
COP1P53622 tA(UGC)OtA(UGC)O 73 nt8.43□□□□□ -1.06
COP1P53622 FCY1YPR062W 477 nt8.43□□□□□ -1.06
COP1P53622 PTC6YCR079W 1329 nt8.43□□□□□ -1.06
COP1P53622 MDM35YKL053C-A 261 nt8.42□□□□□ -1.06
COP1P53622 YLR460CYLR460C 1131 nt8.42□□□□□ -1.06
COP1P53622 MIM1YOL026C 342 nt8.42□□□□□ -1.06
COP1P53622 YPL108WYPL108W 507 nt8.42□□□□□ -1.06
COP1P53622 YER152W-AYER152W-A 567 nt8.4□□□□□ -1.06
COP1P53622 YIL177CYIL177C 5277 nt8.39□□□□□ -1.07
COP1P53622 MET30YIL046W 1923 nt8.39□□□□□ -1.07
COP1P53622 THI6YPL214C 1623 nt8.39□□□□□ -1.07
COP1P53622 GGA2YHR108W 1758 nt8.38□□□□□ -1.07
COP1P53622 tD(GUC)BtD(GUC)B 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)DtD(GUC)D 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)G1tD(GUC)G1 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)G2tD(GUC)G2 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)I1tD(GUC)I1 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)I2tD(GUC)I2 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)J1tD(GUC)J1 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)J2tD(GUC)J2 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)J3tD(GUC)J3 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)J4tD(GUC)J4 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)KtD(GUC)K 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)L1tD(GUC)L1 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)L2tD(GUC)L2 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)MtD(GUC)M 72 nt8.37□□□□□ -1.07
COP1P53622 tD(GUC)OtD(GUC)O 72 nt8.37□□□□□ -1.07
COP1P53622 CHS7YHR142W 951 nt8.36□□□□□ -1.07
COP1P53622 YMR166CYMR166C 1107 nt8.36□□□□□ -1.07
COP1P53622 YNL190WYNL190W 615 nt8.36□□□□□ -1.07
COP1P53622 RTG2YGL252C 1767 nt8.35□□□□□ -1.07
COP1P53622 DPL1YDR294C 1770 nt8.35□□□□□ -1.07
COP1P53622 MAS1YLR163C 1389 nt8.35□□□□□ -1.07
COP1P53622 LSP1YPL004C 1026 nt8.33□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 22.9 ms