Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 tD(GUC)J2tD(GUC)J2 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)J3tD(GUC)J3 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)J4tD(GUC)J4 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)KtD(GUC)K 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)L1tD(GUC)L1 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)L2tD(GUC)L2 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)MtD(GUC)M 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)OtD(GUC)O 72 nt7.06□□□□□ -1.28
SSU72P53538 RPC31YNL151C 756 nt7.06□□□□□ -1.28
SSU72P53538 snR31snR31 225 nt7.06□□□□□ -1.28
SSU72P53538 YMR265CYMR265C 1386 nt7.06□□□□□ -1.28
SSU72P53538 KEL3YPL263C 1956 nt7.06□□□□□ -1.28
SSU72P53538 YPR126CYPR126C 309 nt7.05□□□□□ -1.28
SSU72P53538 INH1YDL181W 258 nt7.04□□□□□ -1.28
SSU72P53538 TVP23YDR084C 600 nt7.04□□□□□ -1.28
SSU72P53538 ELO1YJL196C 933 nt7.04□□□□□ -1.28
SSU72P53538 HAP5YOR358W 729 nt7.04□□□□□ -1.28
SSU72P53538 SMC5YOL034W 3282 nt7.04□□□□□ -1.28
SSU72P53538 POP2YNR052C 1302 nt7.03□□□□□ -1.28
SSU72P53538 SPS100YHR139C 981 nt7.03□□□□□ -1.28
SSU72P53538 RIM2YBR192W 1134 nt7.03□□□□□ -1.28
SSU72P53538 CKI1YLR133W 1749 nt7.03□□□□□ -1.28
SSU72P53538 BAP3YDR046C 1815 nt7.03□□□□□ -1.28
SSU72P53538 HEL1YKR017C 1656 nt7.03□□□□□ -1.28
SSU72P53538 FUN14YAL008W 597 nt7.02□□□□□ -1.29
SSU72P53538 TAF13YML098W 504 nt7.02□□□□□ -1.29
SSU72P53538 ECM27YJR106W 2178 nt7.02□□□□□ -1.29
SSU72P53538 DUS3YLR401C 2007 nt7.01□□□□□ -1.29
SSU72P53538 CRN1YLR429W 1956 nt7.01□□□□□ -1.29
SSU72P53538 YEL008WYEL008W 381 nt7.01□□□□□ -1.29
SSU72P53538 OPI3YJR073C 621 nt7.01□□□□□ -1.29
SSU72P53538 SNZ1YMR096W 894 nt7□□□□□ -1.29
SSU72P53538 MHF1YOL086W-A 273 nt7□□□□□ -1.29
SSU72P53538 CTI6YPL181W 1521 nt7□□□□□ -1.29
SSU72P53538 YFR036W-AYFR036W-A 651 nt6.99□□□□□ -1.29
SSU72P53538 YIL108WYIL108W 2091 nt6.99□□□□□ -1.29
SSU72P53538 ENO2YHR174W 1314 nt6.99□□□□□ -1.29
SSU72P53538 ADE16YLR028C 1776 nt6.98□□□□□ -1.29
SSU72P53538 ABZ2YMR289W 1125 nt6.98□□□□□ -1.29
SSU72P53538 AIM34YMR003W 597 nt6.97□□□□□ -1.29
SSU72P53538 ADH6YMR318C 1083 nt6.96□□□□□ -1.3
SSU72P53538 TOP3YLR234W 1971 nt6.96□□□□□ -1.3
SSU72P53538 AGP3YFL055W 1677 nt6.96□□□□□ -1.3
SSU72P53538 DAL7YIR031C 1665 nt6.96□□□□□ -1.3
SSU72P53538 SUV3YPL029W 2214 nt6.96□□□□□ -1.3
SSU72P53538 AMF1YOR378W 1548 nt6.96□□□□□ -1.3
SSU72P53538 POT1YIL160C 1254 nt6.95□□□□□ -1.3
SSU72P53538 HXT13YEL069C 1695 nt6.95□□□□□ -1.3
SSU72P53538 DPL1YDR294C 1770 nt6.95□□□□□ -1.3
SSU72P53538 YDR467CYDR467C 327 nt6.94□□□□□ -1.3
SSU72P53538 ATP10YLR393W 840 nt6.94□□□□□ -1.3
SSU72P53538 SWT21YNL187W 1074 nt6.93□□□□□ -1.3
SSU72P53538 YNL040WYNL040W 1371 nt6.93□□□□□ -1.3
SSU72P53538 LEU4YNL104C 1860 nt6.92□□□□□ -1.3
SSU72P53538 MSB3YNL293W 1902 nt6.92□□□□□ -1.3
SSU72P53538 CRC1YOR100C 984 nt6.92□□□□□ -1.3
SSU72P53538 YCR061WYCR061W 1896 nt6.92□□□□□ -1.3
SSU72P53538 ITR1YDR497C 1755 nt6.9□□□□□ -1.3
SSU72P53538 BIM1YER016W 1035 nt6.9□□□□□ -1.3
SSU72P53538 PFS2YNL317W 1398 nt6.9□□□□□ -1.31
SSU72P53538 LEU2YCL018W 1095 nt6.89□□□□□ -1.31
SSU72P53538 GSF2YML048W 1212 nt6.88□□□□□ -1.31
SSU72P53538 ORT1YOR130C 879 nt6.88□□□□□ -1.31
SSU72P53538 AFG2YLR397C 2343 nt6.88□□□□□ -1.31
SSU72P53538 tE(CUC)DtE(CUC)D 72 nt6.87□□□□□ -1.31
SSU72P53538 tE(CUC)ItE(CUC)I 72 nt6.87□□□□□ -1.31
SSU72P53538 SBP1YHL034C 885 nt6.87□□□□□ -1.31
SSU72P53538 GPM1YKL152C 744 nt6.87□□□□□ -1.31
SSU72P53538 YBL095WYBL095W 813 nt6.87□□□□□ -1.31
SSU72P53538 STE4YOR212W 1272 nt6.87□□□□□ -1.31
SSU72P53538 KRE1YNL322C 942 nt6.86□□□□□ -1.31
SSU72P53538 KGD2YDR148C 1392 nt6.85□□□□□ -1.31
SSU72P53538 TPC1YGR096W 945 nt6.85□□□□□ -1.31
SSU72P53538 CPD1YGR247W 720 nt6.85□□□□□ -1.31
SSU72P53538 YMC2YBR104W 990 nt6.85□□□□□ -1.31
SSU72P53538 GGA2YHR108W 1758 nt6.85□□□□□ -1.31
SSU72P53538 CHA1YCL064C 1083 nt6.84□□□□□ -1.31
SSU72P53538 YKL053WYKL053W 375 nt6.84□□□□□ -1.31
SSU72P53538 snR4snR4 186 nt6.84□□□□□ -1.31
SSU72P53538 YER152CYER152C 1332 nt6.83□□□□□ -1.32
SSU72P53538 YIP4YGL198W 708 nt6.83□□□□□ -1.32
SSU72P53538 NPP2YEL016C 1482 nt6.83□□□□□ -1.32
SSU72P53538 YOS9YDR057W 1629 nt6.83□□□□□ -1.32
SSU72P53538 SRP54YPR088C 1626 nt6.83□□□□□ -1.32
SSU72P53538 HSV2YGR223C 1347 nt6.82□□□□□ -1.32
SSU72P53538 ASN2YGR124W 1719 nt6.82□□□□□ -1.32
SSU72P53538 TUB4YLR212C 1422 nt6.82□□□□□ -1.32
SSU72P53538 SLM3YDL033C 1254 nt6.81□□□□□ -1.32
SSU72P53538 MAS2YHR024C 1449 nt6.81□□□□□ -1.32
SSU72P53538 NAM8YHR086W 1572 nt6.81□□□□□ -1.32
SSU72P53538 CIR2YOR356W 1896 nt6.81□□□□□ -1.32
SSU72P53538 SAN1YDR143C 1833 nt6.8□□□□□ -1.32
SSU72P53538 YHR131CYHR131C 2553 nt6.8□□□□□ -1.32
SSU72P53538 YPT11YNL304W 1254 nt6.8□□□□□ -1.32
SSU72P53538 ATO2YNR002C 849 nt6.8□□□□□ -1.32
SSU72P53538 REX2YLR059C 810 nt6.79□□□□□ -1.32
SSU72P53538 FSH2YMR222C 672 nt6.79□□□□□ -1.32
SSU72P53538 PRP2YNR011C 2631 nt6.79□□□□□ -1.32
SSU72P53538 PRC1YMR297W 1599 nt6.78□□□□□ -1.32
SSU72P53538 ADE17YMR120C 1779 nt6.78□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms