Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hmga2P52927 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmga2P52927 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmga2P52927 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmga2P52927 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmga2P52927 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hmga2P52927 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmga2P52927 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmga2P52927 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hmga2P52927 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hmga2P52927 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hmga2P52927 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hmga2P52927 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hmga2P52927 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmga2P52927 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmga2P52927 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmga2P52927 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmga2P52927 Gm26115-201ENSMUST00000175605 87 ntBASIC20.35■□□□□ 0.85
Hmga2P52927 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmga2P52927 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hmga2P52927 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hmga2P52927 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hmga2P52927 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hmga2P52927 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hmga2P52927 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Hmga2P52927 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmga2P52927 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hmga2P52927 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hmga2P52927 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hmga2P52927 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Hmga2P52927 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hmga2P52927 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hmga2P52927 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Hmga2P52927 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmga2P52927 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmga2P52927 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmga2P52927 Gm8109-201ENSMUST00000194076 746 ntBASIC20.29■□□□□ 0.84
Hmga2P52927 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hmga2P52927 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga2P52927 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga2P52927 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga2P52927 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga2P52927 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmga2P52927 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmga2P52927 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmga2P52927 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmga2P52927 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Hmga2P52927 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmga2P52927 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga2P52927 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmga2P52927 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga2P52927 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga2P52927 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hmga2P52927 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmga2P52927 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga2P52927 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga2P52927 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmga2P52927 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.22■□□□□ 0.83
Hmga2P52927 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.21■□□□□ 0.83
Hmga2P52927 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmga2P52927 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga2P52927 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga2P52927 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga2P52927 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.2■□□□□ 0.82
Hmga2P52927 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga2P52927 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga2P52927 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga2P52927 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmga2P52927 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hmga2P52927 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hmga2P52927 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmga2P52927 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmga2P52927 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hmga2P52927 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hmga2P52927 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hmga2P52927 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Hmga2P52927 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Hmga2P52927 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmga2P52927 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Hmga2P52927 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hmga2P52927 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Hmga2P52927 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.15■□□□□ 0.82
Hmga2P52927 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Hmga2P52927 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hmga2P52927 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hmga2P52927 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Hmga2P52927 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga2P52927 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga2P52927 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Hmga2P52927 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hmga2P52927 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.14■□□□□ 0.81
Hmga2P52927 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hmga2P52927 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmga2P52927 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmga2P52927 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmga2P52927 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmga2P52927 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmga2P52927 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hmga2P52927 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hmga2P52927 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms