Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.82■□□□□ 0.92
Ccl9P51670 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccl9P51670 Gm9397-201ENSMUST00000200125 605 ntBASIC20.81■□□□□ 0.92
Ccl9P51670 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccl9P51670 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccl9P51670 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ccl9P51670 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccl9P51670 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccl9P51670 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccl9P51670 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.79■□□□□ 0.92
Ccl9P51670 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ccl9P51670 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ccl9P51670 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccl9P51670 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Ccl9P51670 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccl9P51670 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccl9P51670 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccl9P51670 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.77■□□□□ 0.92
Ccl9P51670 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccl9P51670 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccl9P51670 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccl9P51670 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.76■□□□□ 0.91
Ccl9P51670 Gm45855-201ENSMUST00000212546 880 ntBASIC20.76■□□□□ 0.91
Ccl9P51670 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccl9P51670 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccl9P51670 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccl9P51670 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.74■□□□□ 0.91
Ccl9P51670 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.74■□□□□ 0.91
Ccl9P51670 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccl9P51670 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccl9P51670 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccl9P51670 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccl9P51670 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccl9P51670 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccl9P51670 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccl9P51670 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccl9P51670 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccl9P51670 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccl9P51670 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccl9P51670 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccl9P51670 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccl9P51670 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccl9P51670 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.68■□□□□ 0.9
Ccl9P51670 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccl9P51670 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ccl9P51670 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccl9P51670 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccl9P51670 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Ccl9P51670 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccl9P51670 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccl9P51670 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ccl9P51670 Gm24970-201ENSMUST00000175582 82 ntBASIC20.67■□□□□ 0.9
Ccl9P51670 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccl9P51670 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccl9P51670 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccl9P51670 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccl9P51670 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccl9P51670 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccl9P51670 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccl9P51670 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccl9P51670 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccl9P51670 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccl9P51670 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Ccl9P51670 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.64■□□□□ 0.89
Ccl9P51670 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccl9P51670 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccl9P51670 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccl9P51670 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ccl9P51670 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccl9P51670 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccl9P51670 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccl9P51670 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccl9P51670 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccl9P51670 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccl9P51670 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccl9P51670 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccl9P51670 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccl9P51670 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccl9P51670 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccl9P51670 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.59■□□□□ 0.89
Ccl9P51670 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccl9P51670 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccl9P51670 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccl9P51670 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccl9P51670 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccl9P51670 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccl9P51670 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccl9P51670 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccl9P51670 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccl9P51670 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ccl9P51670 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Ccl9P51670 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccl9P51670 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl9P51670 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl9P51670 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccl9P51670 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ccl9P51670 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccl9P51670 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl9P51670 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccl9P51670 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms