Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RAB5CP51148 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB5CP51148 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RAB5CP51148 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAB5CP51148 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB5CP51148 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB5CP51148 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAB5CP51148 BX255925.1-201ENST00000566954 1854 ntBASIC20.83■□□□□ 0.92
RAB5CP51148 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB5CP51148 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB5CP51148 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB5CP51148 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.81■□□□□ 0.92
RAB5CP51148 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB5CP51148 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB5CP51148 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB5CP51148 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB5CP51148 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RAB5CP51148 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB5CP51148 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB5CP51148 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB5CP51148 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB5CP51148 AL449106.1-201ENST00000608517 1980 ntBASIC20.79■□□□□ 0.92
RAB5CP51148 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB5CP51148 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB5CP51148 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB5CP51148 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB5CP51148 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB5CP51148 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB5CP51148 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB5CP51148 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB5CP51148 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB5CP51148 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB5CP51148 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB5CP51148 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB5CP51148 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RAB5CP51148 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
RAB5CP51148 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB5CP51148 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB5CP51148 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAB5CP51148 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB5CP51148 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB5CP51148 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB5CP51148 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB5CP51148 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB5CP51148 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB5CP51148 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB5CP51148 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB5CP51148 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB5CP51148 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RAB5CP51148 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB5CP51148 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.74■□□□□ 0.91
RAB5CP51148 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.73■□□□□ 0.91
RAB5CP51148 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RAB5CP51148 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB5CP51148 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB5CP51148 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB5CP51148 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB5CP51148 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB5CP51148 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RAB5CP51148 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB5CP51148 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
RAB5CP51148 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB5CP51148 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB5CP51148 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RAB5CP51148 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB5CP51148 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB5CP51148 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB5CP51148 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB5CP51148 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB5CP51148 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RAB5CP51148 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB5CP51148 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB5CP51148 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB5CP51148 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB5CP51148 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB5CP51148 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB5CP51148 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RAB5CP51148 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RAB5CP51148 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB5CP51148 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB5CP51148 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB5CP51148 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB5CP51148 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB5CP51148 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB5CP51148 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB5CP51148 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB5CP51148 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB5CP51148 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB5CP51148 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RAB5CP51148 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB5CP51148 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
RAB5CP51148 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB5CP51148 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RAB5CP51148 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
RAB5CP51148 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB5CP51148 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RAB5CP51148 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB5CP51148 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RAB5CP51148 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB5CP51148 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms