Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sox18P43680 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Sox18P43680 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sox18P43680 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Sox18P43680 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sox18P43680 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Sox18P43680 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.16■■□□□ 1.3
Sox18P43680 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sox18P43680 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sox18P43680 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sox18P43680 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sox18P43680 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sox18P43680 Scarna2-201ENSMUST00000157560 414 ntBASIC23.15■■□□□ 1.3
Sox18P43680 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Sox18P43680 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.15■■□□□ 1.3
Sox18P43680 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sox18P43680 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Sox18P43680 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sox18P43680 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sox18P43680 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sox18P43680 Gm11687-201ENSMUST00000118911 886 ntBASIC23.14■■□□□ 1.29
Sox18P43680 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Sox18P43680 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sox18P43680 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sox18P43680 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sox18P43680 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Sox18P43680 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
Sox18P43680 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sox18P43680 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.11■■□□□ 1.29
Sox18P43680 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sox18P43680 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Sox18P43680 Gm9806-201ENSMUST00000051080 552 ntBASIC23.1■■□□□ 1.29
Sox18P43680 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Sox18P43680 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sox18P43680 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sox18P43680 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sox18P43680 Particl-201ENSMUST00000205370 1560 ntBASIC23.09■■□□□ 1.29
Sox18P43680 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Sox18P43680 Gm4799-201ENSMUST00000095396 657 ntBASIC23.08■■□□□ 1.29
Sox18P43680 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.06■■□□□ 1.28
Sox18P43680 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sox18P43680 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sox18P43680 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Sox18P43680 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sox18P43680 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sox18P43680 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sox18P43680 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sox18P43680 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sox18P43680 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sox18P43680 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sox18P43680 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sox18P43680 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sox18P43680 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sox18P43680 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
Sox18P43680 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sox18P43680 Gm7332-201ENSMUST00000118351 454 ntBASIC23■■□□□ 1.27
Sox18P43680 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23■■□□□ 1.27
Sox18P43680 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23■■□□□ 1.27
Sox18P43680 Gm22567-201ENSMUST00000175542 342 ntBASIC22.99■■□□□ 1.27
Sox18P43680 Gm16437-201ENSMUST00000025669 507 ntBASIC22.99■■□□□ 1.27
Sox18P43680 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sox18P43680 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sox18P43680 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Sox18P43680 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox18P43680 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox18P43680 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox18P43680 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.96■■□□□ 1.27
Sox18P43680 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sox18P43680 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.96■■□□□ 1.27
Sox18P43680 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.95■■□□□ 1.26
Sox18P43680 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sox18P43680 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sox18P43680 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.94■■□□□ 1.26
Sox18P43680 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Sox18P43680 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.94■■□□□ 1.26
Sox18P43680 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.94■■□□□ 1.26
Sox18P43680 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Sox18P43680 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.94■■□□□ 1.26
Sox18P43680 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.94■■□□□ 1.26
Sox18P43680 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Sox18P43680 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Sox18P43680 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sox18P43680 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sox18P43680 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sox18P43680 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Sox18P43680 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.91■■□□□ 1.26
Sox18P43680 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.91■■□□□ 1.26
Sox18P43680 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Sox18P43680 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sox18P43680 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Sox18P43680 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.89■■□□□ 1.25
Sox18P43680 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sox18P43680 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sox18P43680 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Sox18P43680 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sox18P43680 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.87■■□□□ 1.25
Sox18P43680 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sox18P43680 Gm27502-201ENSMUST00000183495 199 ntBASIC22.87■■□□□ 1.25
Sox18P43680 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sox18P43680 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms