Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd27P41272 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd27P41272 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd27P41272 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
Cd27P41272 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.36■□□□□ 0.69
Cd27P41272 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.36■□□□□ 0.69
Cd27P41272 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd27P41272 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cd27P41272 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd27P41272 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.35■□□□□ 0.69
Cd27P41272 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd27P41272 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cd27P41272 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd27P41272 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.34■□□□□ 0.69
Cd27P41272 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.34■□□□□ 0.69
Cd27P41272 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd27P41272 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd27P41272 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd27P41272 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd27P41272 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cd27P41272 Gm30023-201ENSMUST00000197970 889 ntBASIC19.33■□□□□ 0.68
Cd27P41272 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cd27P41272 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cd27P41272 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd27P41272 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.32■□□□□ 0.68
Cd27P41272 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cd27P41272 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd27P41272 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cd27P41272 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cd27P41272 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
Cd27P41272 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Cd27P41272 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cd27P41272 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cd27P41272 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd27P41272 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd27P41272 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cd27P41272 Nkain2-201ENSMUST00000092602 558 ntBASIC19.28■□□□□ 0.68
Cd27P41272 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cd27P41272 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cd27P41272 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cd27P41272 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.27■□□□□ 0.68
Cd27P41272 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.27■□□□□ 0.68
Cd27P41272 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cd27P41272 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.27■□□□□ 0.68
Cd27P41272 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cd27P41272 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cd27P41272 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cd27P41272 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Cd27P41272 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cd27P41272 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.25■□□□□ 0.67
Cd27P41272 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.25■□□□□ 0.67
Cd27P41272 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd27P41272 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd27P41272 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cd27P41272 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cd27P41272 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd27P41272 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cd27P41272 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cd27P41272 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cd27P41272 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd27P41272 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cd27P41272 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd27P41272 Gm6821-201ENSMUST00000107540 542 ntBASIC19.2■□□□□ 0.66
Cd27P41272 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cd27P41272 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cd27P41272 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cd27P41272 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.19■□□□□ 0.66
Cd27P41272 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cd27P41272 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Cd27P41272 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cd27P41272 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd27P41272 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cd27P41272 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cd27P41272 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Cd27P41272 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cd27P41272 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd27P41272 Gm8503-201ENSMUST00000118131 455 ntBASIC19.17■□□□□ 0.66
Cd27P41272 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cd27P41272 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cd27P41272 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.16■□□□□ 0.66
Cd27P41272 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.15■□□□□ 0.66
Cd27P41272 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cd27P41272 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cd27P41272 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.14■□□□□ 0.65
Cd27P41272 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cd27P41272 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cd27P41272 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cd27P41272 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.13■□□□□ 0.65
Cd27P41272 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cd27P41272 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.13■□□□□ 0.65
Cd27P41272 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cd27P41272 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.12■□□□□ 0.65
Cd27P41272 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cd27P41272 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cd27P41272 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cd27P41272 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cd27P41272 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cd27P41272 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cd27P41272 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cd27P41272 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms