Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.25■■□□□ 1.15
CDKN1AP38936 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.24■■□□□ 1.15
CDKN1AP38936 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDKN1AP38936 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CDKN1AP38936 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDKN1AP38936 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.23■■□□□ 1.15
CDKN1AP38936 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.22■■□□□ 1.15
CDKN1AP38936 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.22■■□□□ 1.15
CDKN1AP38936 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDKN1AP38936 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDKN1AP38936 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDKN1AP38936 AC010864.1-201ENST00000609407 1511 ntBASIC22.21■■□□□ 1.15
CDKN1AP38936 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.2■■□□□ 1.15
CDKN1AP38936 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDKN1AP38936 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDKN1AP38936 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.2■■□□□ 1.14
CDKN1AP38936 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CDKN1AP38936 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.2■■□□□ 1.14
CDKN1AP38936 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CDKN1AP38936 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDKN1AP38936 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.18■■□□□ 1.14
CDKN1AP38936 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.17■■□□□ 1.14
CDKN1AP38936 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDKN1AP38936 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CDKN1AP38936 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDKN1AP38936 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.16■■□□□ 1.14
CDKN1AP38936 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDKN1AP38936 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDKN1AP38936 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.15■■□□□ 1.14
CDKN1AP38936 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDKN1AP38936 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDKN1AP38936 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CDKN1AP38936 LINC00273-201ENST00000539813 1452 ntBASIC22.15■■□□□ 1.14
CDKN1AP38936 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.15■■□□□ 1.14
CDKN1AP38936 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.15■■□□□ 1.14
CDKN1AP38936 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDKN1AP38936 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CDKN1AP38936 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.14■■□□□ 1.13
CDKN1AP38936 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.14■■□□□ 1.13
CDKN1AP38936 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CDKN1AP38936 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CDKN1AP38936 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.12■■□□□ 1.13
CDKN1AP38936 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CDKN1AP38936 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKN1AP38936 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKN1AP38936 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKN1AP38936 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKN1AP38936 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKN1AP38936 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKN1AP38936 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDKN1AP38936 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKN1AP38936 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKN1AP38936 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDKN1AP38936 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.1■■□□□ 1.13
CDKN1AP38936 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.1■■□□□ 1.13
CDKN1AP38936 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDKN1AP38936 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDKN1AP38936 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDKN1AP38936 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDKN1AP38936 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDKN1AP38936 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDKN1AP38936 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.08■■□□□ 1.12
CDKN1AP38936 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDKN1AP38936 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.06■■□□□ 1.12
CDKN1AP38936 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.06■■□□□ 1.12
CDKN1AP38936 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDKN1AP38936 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDKN1AP38936 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDKN1AP38936 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDKN1AP38936 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CDKN1AP38936 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.05■■□□□ 1.12
CDKN1AP38936 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDKN1AP38936 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDKN1AP38936 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDKN1AP38936 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
CDKN1AP38936 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.03■■□□□ 1.12
CDKN1AP38936 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDKN1AP38936 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CDKN1AP38936 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
CDKN1AP38936 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKN1AP38936 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKN1AP38936 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDKN1AP38936 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.01■■□□□ 1.11
CDKN1AP38936 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDKN1AP38936 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDKN1AP38936 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDKN1AP38936 AC127502.1-201ENST00000399971 1502 ntBASIC22.01■■□□□ 1.11
CDKN1AP38936 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDKN1AP38936 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22■■□□□ 1.11
CDKN1AP38936 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CDKN1AP38936 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
CDKN1AP38936 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDKN1AP38936 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CDKN1AP38936 GPX1-201ENST00000419349 1106 ntBASIC21.98■■□□□ 1.11
CDKN1AP38936 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.98■■□□□ 1.11
CDKN1AP38936 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CDKN1AP38936 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.97■■□□□ 1.11
CDKN1AP38936 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDKN1AP38936 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDKN1AP38936 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms