Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 RPC31YNL151C 756 nt7.17□□□□□ -1.26
CUE1P38428 SWT21YNL187W 1074 nt7.17□□□□□ -1.26
CUE1P38428 MHF1YOL086W-A 273 nt7.17□□□□□ -1.26
CUE1P38428 TIP1YBR067C 633 nt7.17□□□□□ -1.26
CUE1P38428 KRR1YCL059C 951 nt7.16□□□□□ -1.26
CUE1P38428 PAU5YFL020C 369 nt7.16□□□□□ -1.26
CUE1P38428 HAP5YOR358W 729 nt7.16□□□□□ -1.26
CUE1P38428 KEL3YPL263C 1956 nt7.15□□□□□ -1.26
CUE1P38428 TAF13YML098W 504 nt7.15□□□□□ -1.26
CUE1P38428 DUR3YHL016C 2208 nt7.14□□□□□ -1.27
CUE1P38428 NSG2YNL156C 900 nt7.14□□□□□ -1.27
CUE1P38428 YNL190WYNL190W 615 nt7.14□□□□□ -1.27
CUE1P38428 POP2YNR052C 1302 nt7.14□□□□□ -1.27
CUE1P38428 ORT1YOR130C 879 nt7.13□□□□□ -1.27
CUE1P38428 MET30YIL046W 1923 nt7.13□□□□□ -1.27
CUE1P38428 SEN2YLR105C 1134 nt7.12□□□□□ -1.27
CUE1P38428 CRC1YOR100C 984 nt7.12□□□□□ -1.27
CUE1P38428 FET5YFL041W 1869 nt7.12□□□□□ -1.27
CUE1P38428 ADE16YLR028C 1776 nt7.11□□□□□ -1.27
CUE1P38428 ABZ2YMR289W 1125 nt7.11□□□□□ -1.27
CUE1P38428 PUS7YOR243C 2031 nt7.11□□□□□ -1.27
CUE1P38428 DUS3YLR401C 2007 nt7.1□□□□□ -1.27
CUE1P38428 PGC1YPL206C 966 nt7.1□□□□□ -1.27
CUE1P38428 MET1YKR069W 1782 nt7.1□□□□□ -1.27
CUE1P38428 RPN14YGL004C 1254 nt7.09□□□□□ -1.27
CUE1P38428 NIF3YGL221C 867 nt7.09□□□□□ -1.27
CUE1P38428 NAP1YKR048C 1254 nt7.09□□□□□ -1.27
CUE1P38428 POT1YIL160C 1254 nt7.08□□□□□ -1.28
CUE1P38428 STP3YLR375W 1032 nt7.08□□□□□ -1.28
CUE1P38428 LEU4YNL104C 1860 nt7.07□□□□□ -1.28
CUE1P38428 AMF1YOR378W 1548 nt7.06□□□□□ -1.28
CUE1P38428 snR31snR31 225 nt7.06□□□□□ -1.28
CUE1P38428 TUB4YLR212C 1422 nt7.05□□□□□ -1.28
CUE1P38428 APS2YJR058C 444 nt7.05□□□□□ -1.28
CUE1P38428 CDD1YLR245C 429 nt7.05□□□□□ -1.28
CUE1P38428 YBR232CYBR232C 360 nt7.05□□□□□ -1.28
CUE1P38428 YKL053WYKL053W 375 nt7.04□□□□□ -1.28
CUE1P38428 snR4snR4 186 nt7.04□□□□□ -1.28
CUE1P38428 KGD2YDR148C 1392 nt7.04□□□□□ -1.28
CUE1P38428 tE(CUC)DtE(CUC)D 72 nt7.03□□□□□ -1.28
CUE1P38428 tE(CUC)ItE(CUC)I 72 nt7.03□□□□□ -1.28
CUE1P38428 SAN1YDR143C 1833 nt7.03□□□□□ -1.28
CUE1P38428 LAS17YOR181W 1902 nt7.03□□□□□ -1.28
CUE1P38428 GSF2YML048W 1212 nt7.02□□□□□ -1.29
CUE1P38428 PFS2YNL317W 1398 nt7.01□□□□□ -1.29
CUE1P38428 RTG2YGL252C 1767 nt7□□□□□ -1.29
CUE1P38428 TPC1YGR096W 945 nt7□□□□□ -1.29
CUE1P38428 NAS2YIL007C 663 nt7□□□□□ -1.29
CUE1P38428 YJL064WYJL064W 396 nt7□□□□□ -1.29
CUE1P38428 PUP1YOR157C 786 nt7□□□□□ -1.29
CUE1P38428 ENO2YHR174W 1314 nt7□□□□□ -1.29
CUE1P38428 NPP2YEL016C 1482 nt6.99□□□□□ -1.29
CUE1P38428 YMR316C-BYMR316C-B 309 nt6.99□□□□□ -1.29
CUE1P38428 THI3YDL080C 1830 nt6.99□□□□□ -1.29
CUE1P38428 YLR173WYLR173W 1827 nt6.99□□□□□ -1.29
CUE1P38428 YDR467CYDR467C 327 nt6.98□□□□□ -1.29
CUE1P38428 HXT11YOL156W 1704 nt6.98□□□□□ -1.29
CUE1P38428 PAR32YDL173W 888 nt6.97□□□□□ -1.29
CUE1P38428 NAM8YHR086W 1572 nt6.97□□□□□ -1.29
CUE1P38428 GPM1YKL152C 744 nt6.97□□□□□ -1.29
CUE1P38428 LEU2YCL018W 1095 nt6.97□□□□□ -1.29
CUE1P38428 DIA4YHR011W 1341 nt6.97□□□□□ -1.29
CUE1P38428 PAU19YMR325W 375 nt6.96□□□□□ -1.3
CUE1P38428 THP3YPR045C 1413 nt6.95□□□□□ -1.3
CUE1P38428 SLM3YDL033C 1254 nt6.95□□□□□ -1.3
CUE1P38428 AIM34YMR003W 597 nt6.95□□□□□ -1.3
CUE1P38428 REX2YLR059C 810 nt6.94□□□□□ -1.3
CUE1P38428 TRP2YER090W 1524 nt6.94□□□□□ -1.3
CUE1P38428 HSV2YGR223C 1347 nt6.94□□□□□ -1.3
CUE1P38428 THI6YPL214C 1623 nt6.94□□□□□ -1.3
CUE1P38428 SRP54YPR088C 1626 nt6.94□□□□□ -1.3
CUE1P38428 SBP1YHL034C 885 nt6.93□□□□□ -1.3
CUE1P38428 FSH2YMR222C 672 nt6.93□□□□□ -1.3
CUE1P38428 GGA2YHR108W 1758 nt6.92□□□□□ -1.3
CUE1P38428 KRE1YNL322C 942 nt6.92□□□□□ -1.3
CUE1P38428 YBL095WYBL095W 813 nt6.92□□□□□ -1.3
CUE1P38428 SPE2YOL052C 1191 nt6.91□□□□□ -1.3
CUE1P38428 FRT1YOR324C 1809 nt6.91□□□□□ -1.3
CUE1P38428 ITR1YDR497C 1755 nt6.9□□□□□ -1.3
CUE1P38428 GGC1YDL198C 903 nt6.9□□□□□ -1.3
CUE1P38428 SNU66YOR308C 1764 nt6.9□□□□□ -1.31
CUE1P38428 IGD1YFR017C 588 nt6.89□□□□□ -1.31
CUE1P38428 MDH2YOL126C 1134 nt6.89□□□□□ -1.31
CUE1P38428 SLG1YOR008C 1137 nt6.89□□□□□ -1.31
CUE1P38428 PHB2YGR231C 933 nt6.88□□□□□ -1.31
CUE1P38428 GAS1YMR307W 1680 nt6.87□□□□□ -1.31
CUE1P38428 SDS24YBR214W 1584 nt6.87□□□□□ -1.31
CUE1P38428 SRM1YGL097W 1449 nt6.87□□□□□ -1.31
CUE1P38428 AAC3YBR085W 924 nt6.87□□□□□ -1.31
CUE1P38428 Q0010Q0010 387 nt6.87□□□□□ -1.31
CUE1P38428 YLR072WYLR072W 2082 nt6.87□□□□□ -1.31
CUE1P38428 TOP3YLR234W 1971 nt6.87□□□□□ -1.31
CUE1P38428 ADE2YOR128C 1716 nt6.87□□□□□ -1.31
CUE1P38428 GCD11YER025W 1584 nt6.86□□□□□ -1.31
CUE1P38428 YMR210WYMR210W 1350 nt6.86□□□□□ -1.31
CUE1P38428 ATP10YLR393W 840 nt6.86□□□□□ -1.31
CUE1P38428 ADE5,7YGL234W 2409 nt6.86□□□□□ -1.31
CUE1P38428 VBA3YCL069W 1377 nt6.85□□□□□ -1.31
CUE1P38428 PTC6YCR079W 1329 nt6.85□□□□□ -1.31
CUE1P38428 EMC3YKL207W 762 nt6.85□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 72.9 ms