Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC00273-201ENST00000539813 1452 ntBASIC32.79■■■□□ 2.84
PDE6BP35913 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.79■■■□□ 2.84
PDE6BP35913 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
PDE6BP35913 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.78■■■□□ 2.84
PDE6BP35913 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
PDE6BP35913 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
PDE6BP35913 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
PDE6BP35913 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
PDE6BP35913 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.76■■■□□ 2.83
PDE6BP35913 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.76■■■□□ 2.83
PDE6BP35913 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
PDE6BP35913 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
PDE6BP35913 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.75■■■□□ 2.83
PDE6BP35913 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
PDE6BP35913 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
PDE6BP35913 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
PDE6BP35913 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
PDE6BP35913 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
PDE6BP35913 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
PDE6BP35913 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.71■■■□□ 2.83
PDE6BP35913 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
PDE6BP35913 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC32.71■■■□□ 2.83
PDE6BP35913 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
PDE6BP35913 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.7■■■□□ 2.83
PDE6BP35913 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.7■■■□□ 2.83
PDE6BP35913 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
PDE6BP35913 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.7■■■□□ 2.83
PDE6BP35913 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PDE6BP35913 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.68■■■□□ 2.82
PDE6BP35913 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.65■■■□□ 2.82
PDE6BP35913 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
PDE6BP35913 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
PDE6BP35913 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.65■■■□□ 2.82
PDE6BP35913 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
PDE6BP35913 AC022413.1-201ENST00000624602 984 ntBASIC32.64■■■□□ 2.82
PDE6BP35913 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
PDE6BP35913 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PDE6BP35913 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
PDE6BP35913 NTF6A-201ENST00000591175 560 ntBASIC32.61■■■□□ 2.81
PDE6BP35913 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.6■■■□□ 2.81
PDE6BP35913 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.6■■■□□ 2.81
PDE6BP35913 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.6■■■□□ 2.81
PDE6BP35913 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
PDE6BP35913 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.59■■■□□ 2.81
PDE6BP35913 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC32.59■■■□□ 2.81
PDE6BP35913 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.59■■■□□ 2.81
PDE6BP35913 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
PDE6BP35913 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.58■■■□□ 2.81
PDE6BP35913 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
PDE6BP35913 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.58■■■□□ 2.81
PDE6BP35913 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC32.57■■■□□ 2.8
PDE6BP35913 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC32.57■■■□□ 2.8
PDE6BP35913 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
PDE6BP35913 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
PDE6BP35913 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC32.56■■■□□ 2.8
PDE6BP35913 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PDE6BP35913 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
PDE6BP35913 AC012354.3-201ENST00000623734 483 ntBASIC32.55■■■□□ 2.8
PDE6BP35913 AL161658.1-201ENST00000623641 1967 ntBASIC32.55■■■□□ 2.8
PDE6BP35913 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
PDE6BP35913 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.55■■■□□ 2.8
PDE6BP35913 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
PDE6BP35913 AC008813.1-201ENST00000536597 885 ntBASIC32.53■■■□□ 2.8
PDE6BP35913 AC010864.1-201ENST00000609407 1511 ntBASIC32.51■■■□□ 2.8
PDE6BP35913 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PDE6BP35913 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PDE6BP35913 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PDE6BP35913 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.51■■■□□ 2.79
PDE6BP35913 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
PDE6BP35913 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC32.5■■■□□ 2.79
PDE6BP35913 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
PDE6BP35913 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
PDE6BP35913 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
PDE6BP35913 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
PDE6BP35913 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.48■■■□□ 2.79
PDE6BP35913 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.46■■■□□ 2.79
PDE6BP35913 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
PDE6BP35913 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.46■■■□□ 2.79
PDE6BP35913 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
PDE6BP35913 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
PDE6BP35913 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
PDE6BP35913 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
PDE6BP35913 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PDE6BP35913 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.43■■■□□ 2.78
PDE6BP35913 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
PDE6BP35913 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
PDE6BP35913 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PDE6BP35913 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
PDE6BP35913 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
PDE6BP35913 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
PDE6BP35913 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
PDE6BP35913 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
PDE6BP35913 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.37■■■□□ 2.77
PDE6BP35913 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
PDE6BP35913 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.36■■■□□ 2.77
PDE6BP35913 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
PDE6BP35913 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
PDE6BP35913 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
PDE6BP35913 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC32.35■■■□□ 2.77
PDE6BP35913 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms