Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxa1P35582 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Foxa1P35582 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.19■■□□□ 1.14
Foxa1P35582 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Foxa1P35582 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxa1P35582 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Foxa1P35582 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Foxa1P35582 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Foxa1P35582 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.17■■□□□ 1.14
Foxa1P35582 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxa1P35582 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.17■■□□□ 1.14
Foxa1P35582 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Foxa1P35582 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxa1P35582 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxa1P35582 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.16■■□□□ 1.14
Foxa1P35582 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Foxa1P35582 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Foxa1P35582 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Foxa1P35582 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.15■■□□□ 1.14
Foxa1P35582 Gm30023-201ENSMUST00000197970 889 ntBASIC22.15■■□□□ 1.14
Foxa1P35582 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.15■■□□□ 1.14
Foxa1P35582 Nkain2-201ENSMUST00000092602 558 ntBASIC22.15■■□□□ 1.14
Foxa1P35582 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxa1P35582 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Foxa1P35582 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Foxa1P35582 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Foxa1P35582 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Foxa1P35582 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Foxa1P35582 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxa1P35582 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
Foxa1P35582 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Foxa1P35582 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Foxa1P35582 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Foxa1P35582 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.1■■□□□ 1.13
Foxa1P35582 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxa1P35582 Gm6821-201ENSMUST00000107540 542 ntBASIC22.09■■□□□ 1.13
Foxa1P35582 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxa1P35582 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Foxa1P35582 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.08■■□□□ 1.13
Foxa1P35582 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Foxa1P35582 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Foxa1P35582 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Foxa1P35582 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Foxa1P35582 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Foxa1P35582 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Foxa1P35582 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Foxa1P35582 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Foxa1P35582 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Foxa1P35582 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Foxa1P35582 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Foxa1P35582 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Foxa1P35582 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Foxa1P35582 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Foxa1P35582 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Foxa1P35582 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Foxa1P35582 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Foxa1P35582 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
Foxa1P35582 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Foxa1P35582 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Foxa1P35582 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.01■■□□□ 1.11
Foxa1P35582 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Foxa1P35582 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Foxa1P35582 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Foxa1P35582 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Foxa1P35582 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Foxa1P35582 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22■■□□□ 1.11
Foxa1P35582 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Foxa1P35582 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22■■□□□ 1.11
Foxa1P35582 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Foxa1P35582 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Foxa1P35582 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Foxa1P35582 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Foxa1P35582 Gm8503-201ENSMUST00000118131 455 ntBASIC21.98■■□□□ 1.11
Foxa1P35582 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Foxa1P35582 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Foxa1P35582 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Foxa1P35582 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.97■■□□□ 1.11
Foxa1P35582 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.97■■□□□ 1.11
Foxa1P35582 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.96■■□□□ 1.11
Foxa1P35582 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Foxa1P35582 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.95■■□□□ 1.1
Foxa1P35582 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Foxa1P35582 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.94■■□□□ 1.1
Foxa1P35582 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Foxa1P35582 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.94■■□□□ 1.1
Foxa1P35582 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.94■■□□□ 1.1
Foxa1P35582 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.93■■□□□ 1.1
Foxa1P35582 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Foxa1P35582 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Foxa1P35582 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Foxa1P35582 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Foxa1P35582 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Foxa1P35582 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Foxa1P35582 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.9■■□□□ 1.1
Foxa1P35582 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Foxa1P35582 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.89■■□□□ 1.09
Foxa1P35582 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Foxa1P35582 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Foxa1P35582 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Foxa1P35582 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms