Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a1P31648 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a1P31648 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Slc6a1P31648 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a1P31648 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a1P31648 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a1P31648 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Slc6a1P31648 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a1P31648 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.39■□□□□ 0.85
Slc6a1P31648 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a1P31648 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a1P31648 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a1P31648 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a1P31648 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a1P31648 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a1P31648 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a1P31648 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.36■□□□□ 0.85
Slc6a1P31648 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a1P31648 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a1P31648 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a1P31648 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a1P31648 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Slc6a1P31648 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a1P31648 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a1P31648 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a1P31648 Zfp131-205ENSMUST00000223812 663 ntBASIC20.34■□□□□ 0.85
Slc6a1P31648 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.34■□□□□ 0.85
Slc6a1P31648 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Slc6a1P31648 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a1P31648 Gm16148-201ENSMUST00000119653 893 ntBASIC20.33■□□□□ 0.85
Slc6a1P31648 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a1P31648 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a1P31648 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a1P31648 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a1P31648 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a1P31648 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Slc6a1P31648 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a1P31648 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a1P31648 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Slc6a1P31648 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Slc6a1P31648 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a1P31648 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc6a1P31648 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Slc6a1P31648 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.26■□□□□ 0.83
Slc6a1P31648 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a1P31648 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a1P31648 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a1P31648 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc6a1P31648 Peli2-204ENSMUST00000226513 1320 ntBASIC20.26■□□□□ 0.83
Slc6a1P31648 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc6a1P31648 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Slc6a1P31648 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a1P31648 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc6a1P31648 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Slc6a1P31648 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Slc6a1P31648 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a1P31648 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc6a1P31648 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.23■□□□□ 0.83
Slc6a1P31648 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc6a1P31648 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a1P31648 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a1P31648 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a1P31648 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a1P31648 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc6a1P31648 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Slc6a1P31648 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc6a1P31648 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.21■□□□□ 0.83
Slc6a1P31648 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.2■□□□□ 0.83
Slc6a1P31648 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a1P31648 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.2■□□□□ 0.82
Slc6a1P31648 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Slc6a1P31648 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc6a1P31648 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc6a1P31648 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a1P31648 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a1P31648 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc6a1P31648 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Slc6a1P31648 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a1P31648 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Slc6a1P31648 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a1P31648 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc6a1P31648 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a1P31648 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.16■□□□□ 0.82
Slc6a1P31648 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc6a1P31648 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc6a1P31648 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc6a1P31648 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Slc6a1P31648 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a1P31648 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc6a1P31648 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a1P31648 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a1P31648 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a1P31648 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a1P31648 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a1P31648 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a1P31648 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a1P31648 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc6a1P31648 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Slc6a1P31648 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc6a1P31648 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms