Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 tA(AGC)M2tA(AGC)M2 73 nt8.81□□□□□ -1
MSH2P25847 tA(AGC)PtA(AGC)P 73 nt8.81□□□□□ -1
MSH2P25847 ADE8YDR408C 645 nt8.81□□□□□ -1
MSH2P25847 CDD1YLR245C 429 nt8.81□□□□□ -1
MSH2P25847 ITR2YOL103W 1830 nt8.8□□□□□ -1
MSH2P25847 SSL2YIL143C 2532 nt8.79□□□□□ -1
MSH2P25847 RRT8YOL048C 1029 nt8.79□□□□□ -1
MSH2P25847 ODC1YPL134C 933 nt8.79□□□□□ -1
MSH2P25847 MTO1YGL236C 2010 nt8.78□□□□□ -1
MSH2P25847 RPL12BYDR418W 498 nt8.77□□□□□ -1.01
MSH2P25847 PUS5YLR165C 765 nt8.77□□□□□ -1.01
MSH2P25847 RPD3YNL330C 1302 nt8.77□□□□□ -1.01
MSH2P25847 FRA1YLL029W 2250 nt8.77□□□□□ -1.01
MSH2P25847 YOR343CYOR343C 327 nt8.76□□□□□ -1.01
MSH2P25847 SAC7YDR389W 1965 nt8.75□□□□□ -1.01
MSH2P25847 LYS20YDL182W 1287 nt8.75□□□□□ -1.01
MSH2P25847 YMR007WYMR007W 381 nt8.75□□□□□ -1.01
MSH2P25847 YFR036W-AYFR036W-A 651 nt8.74□□□□□ -1.01
MSH2P25847 ELO1YJL196C 933 nt8.74□□□□□ -1.01
MSH2P25847 VMA11YPL234C 495 nt8.74□□□□□ -1.01
MSH2P25847 AI5_BETAQ0075 1065 nt8.73□□□□□ -1.01
MSH2P25847 FHN1YGR131W 525 nt8.72□□□□□ -1.01
MSH2P25847 NAS2YIL007C 663 nt8.72□□□□□ -1.01
MSH2P25847 SPS100YHR139C 981 nt8.71□□□□□ -1.02
MSH2P25847 FLX1YIL134W 936 nt8.71□□□□□ -1.02
MSH2P25847 YNR064CYNR064C 873 nt8.71□□□□□ -1.02
MSH2P25847 AAC3YBR085W 924 nt8.71□□□□□ -1.02
MSH2P25847 ATG22YCL038C 1587 nt8.7□□□□□ -1.02
MSH2P25847 OPI3YJR073C 621 nt8.7□□□□□ -1.02
MSH2P25847 RCR1YBR005W 642 nt8.7□□□□□ -1.02
MSH2P25847 YHR218WYHR218W 1812 nt8.7□□□□□ -1.02
MSH2P25847 YRF1-2YER190W 5046 nt8.69□□□□□ -1.02
MSH2P25847 YAL016C-AYAL016C-A 315 nt8.69□□□□□ -1.02
MSH2P25847 MGM101YJR144W 810 nt8.69□□□□□ -1.02
MSH2P25847 YOR072WYOR072W 315 nt8.69□□□□□ -1.02
MSH2P25847 SNX3YOR357C 489 nt8.69□□□□□ -1.02
MSH2P25847 KDX1YKL161C 1302 nt8.69□□□□□ -1.02
MSH2P25847 CWP2YKL096W-A 279 nt8.68□□□□□ -1.02
MSH2P25847 MDL2YPL270W 2322 nt8.68□□□□□ -1.02
MSH2P25847 PCP1YGR101W 1041 nt8.67□□□□□ -1.02
MSH2P25847 YOR268CYOR268C 399 nt8.67□□□□□ -1.02
MSH2P25847 MDM35YKL053C-A 261 nt8.66□□□□□ -1.02
MSH2P25847 RMA1YKL132C 1293 nt8.66□□□□□ -1.02
MSH2P25847 IDP3YNL009W 1263 nt8.66□□□□□ -1.02
MSH2P25847 THP3YPR045C 1413 nt8.65□□□□□ -1.02
MSH2P25847 MFG1YDL233W 1377 nt8.65□□□□□ -1.02
MSH2P25847 TVP23YDR084C 600 nt8.65□□□□□ -1.02
MSH2P25847 KEL3YPL263C 1956 nt8.64□□□□□ -1.03
MSH2P25847 YMR265CYMR265C 1386 nt8.63□□□□□ -1.03
MSH2P25847 ENO2YHR174W 1314 nt8.63□□□□□ -1.03
MSH2P25847 SER2YGR208W 930 nt8.63□□□□□ -1.03
MSH2P25847 HRA1HRA1 564 nt8.63□□□□□ -1.03
MSH2P25847 ABZ2YMR289W 1125 nt8.63□□□□□ -1.03
MSH2P25847 RPC31YNL151C 756 nt8.63□□□□□ -1.03
MSH2P25847 HXT10YFL011W 1641 nt8.62□□□□□ -1.03
MSH2P25847 YHR131CYHR131C 2553 nt8.62□□□□□ -1.03
MSH2P25847 FSH2YMR222C 672 nt8.62□□□□□ -1.03
MSH2P25847 HAP5YOR358W 729 nt8.62□□□□□ -1.03
MSH2P25847 MEX67YPL169C 1800 nt8.61□□□□□ -1.03
MSH2P25847 RPN14YGL004C 1254 nt8.6□□□□□ -1.03
MSH2P25847 PHB2YGR231C 933 nt8.59□□□□□ -1.03
MSH2P25847 HTS1YPR033C 1641 nt8.58□□□□□ -1.04
MSH2P25847 SUV3YPL029W 2214 nt8.58□□□□□ -1.04
MSH2P25847 TOS1YBR162C 1368 nt8.58□□□□□ -1.04
MSH2P25847 TOM20YGR082W 552 nt8.57□□□□□ -1.04
MSH2P25847 CYC3YAL039C 810 nt8.57□□□□□ -1.04
MSH2P25847 ADH3YMR083W 1128 nt8.57□□□□□ -1.04
MSH2P25847 REC114YMR133W 1287 nt8.57□□□□□ -1.04
MSH2P25847 RIM2YBR192W 1134 nt8.57□□□□□ -1.04
MSH2P25847 AMF1YOR378W 1548 nt8.57□□□□□ -1.04
MSH2P25847 HDA1YNL021W 2121 nt8.56□□□□□ -1.04
MSH2P25847 GRH1YDR517W 1119 nt8.56□□□□□ -1.04
MSH2P25847 YLR122CYLR122C 378 nt8.56□□□□□ -1.04
MSH2P25847 CRC1YOR100C 984 nt8.56□□□□□ -1.04
MSH2P25847 snR31snR31 225 nt8.56□□□□□ -1.04
MSH2P25847 KRR1YCL059C 951 nt8.55□□□□□ -1.04
MSH2P25847 MET1YKR069W 1782 nt8.55□□□□□ -1.04
MSH2P25847 DPL1YDR294C 1770 nt8.54□□□□□ -1.04
MSH2P25847 EDC2YER035W 438 nt8.54□□□□□ -1.04
MSH2P25847 TPC1YGR096W 945 nt8.54□□□□□ -1.04
MSH2P25847 SWT21YNL187W 1074 nt8.54□□□□□ -1.04
MSH2P25847 SFL1YOR140W 2301 nt8.53□□□□□ -1.04
MSH2P25847 BNS1YGR230W 414 nt8.53□□□□□ -1.04
MSH2P25847 SPE2YOL052C 1191 nt8.53□□□□□ -1.04
MSH2P25847 YKL053WYKL053W 375 nt8.52□□□□□ -1.05
MSH2P25847 ATG17YLR423C 1254 nt8.52□□□□□ -1.05
MSH2P25847 TPN1YGL186C 1740 nt8.51□□□□□ -1.05
MSH2P25847 LEU4YNL104C 1860 nt8.51□□□□□ -1.05
MSH2P25847 HOG1YLR113W 1308 nt8.51□□□□□ -1.05
MSH2P25847 AGP3YFL055W 1677 nt8.5□□□□□ -1.05
MSH2P25847 MOB1YIL106W 945 nt8.5□□□□□ -1.05
MSH2P25847 NSG2YNL156C 900 nt8.5□□□□□ -1.05
MSH2P25847 INH1YDL181W 258 nt8.49□□□□□ -1.05
MSH2P25847 YDR467CYDR467C 327 nt8.49□□□□□ -1.05
MSH2P25847 ARA2YMR041C 1008 nt8.49□□□□□ -1.05
MSH2P25847 YNL165WYNL165W 1221 nt8.49□□□□□ -1.05
MSH2P25847 NBA1YOL070C 1506 nt8.49□□□□□ -1.05
MSH2P25847 SRP102YKL154W 735 nt8.48□□□□□ -1.05
MSH2P25847 LEU2YCL018W 1095 nt8.48□□□□□ -1.05
MSH2P25847 KGD2YDR148C 1392 nt8.48□□□□□ -1.05
Retrieved 100 of 7,029 protein–RNA pairs in 56.3 ms