Protein–RNA interactions for Protein: P20436

RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3, yeastyeast

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB8P20436 YJL064WYJL064W 396 nt7.48□□□□□ -1.21
RPB8P20436 YKR012CYKR012C 378 nt7.48□□□□□ -1.21
RPB8P20436 ACO2YJL200C 2370 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)DtA(AGC)D 73 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)FtA(AGC)F 73 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)GtA(AGC)G 73 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)HtA(AGC)H 73 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)JtA(AGC)J 73 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)K1tA(AGC)K1 73 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)K2tA(AGC)K2 73 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)LtA(AGC)L 73 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)M1tA(AGC)M1 73 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)M2tA(AGC)M2 73 nt7.47□□□□□ -1.21
RPB8P20436 tA(AGC)PtA(AGC)P 73 nt7.47□□□□□ -1.21
RPB8P20436 SBP1YHL034C 885 nt7.47□□□□□ -1.21
RPB8P20436 TOK1YJL093C 2076 nt7.47□□□□□ -1.21
RPB8P20436 SDS24YBR214W 1584 nt7.46□□□□□ -1.21
RPB8P20436 THI3YDL080C 1830 nt7.46□□□□□ -1.21
RPB8P20436 tE(CUC)DtE(CUC)D 72 nt7.46□□□□□ -1.22
RPB8P20436 tE(CUC)ItE(CUC)I 72 nt7.46□□□□□ -1.22
RPB8P20436 YDR467CYDR467C 327 nt7.46□□□□□ -1.22
RPB8P20436 YGR139WYGR139W 339 nt7.46□□□□□ -1.22
RPB8P20436 YDR306CYDR306C 1437 nt7.45□□□□□ -1.22
RPB8P20436 GPM1YKL152C 744 nt7.45□□□□□ -1.22
RPB8P20436 YMR316C-BYMR316C-B 309 nt7.45□□□□□ -1.22
RPB8P20436 VBA3YCL069W 1377 nt7.45□□□□□ -1.22
RPB8P20436 INH1YDL181W 258 nt7.44□□□□□ -1.22
RPB8P20436 FLX1YIL134W 936 nt7.44□□□□□ -1.22
RPB8P20436 PAU19YMR325W 375 nt7.44□□□□□ -1.22
RPB8P20436 IPL1YPL209C 1104 nt7.44□□□□□ -1.22
RPB8P20436 GAS1YMR307W 1680 nt7.43□□□□□ -1.22
RPB8P20436 GGA2YHR108W 1758 nt7.43□□□□□ -1.22
RPB8P20436 NPP2YEL016C 1482 nt7.43□□□□□ -1.22
RPB8P20436 MOB1YIL106W 945 nt7.42□□□□□ -1.22
RPB8P20436 YRF1-2YER190W 5046 nt7.42□□□□□ -1.22
RPB8P20436 PTC6YCR079W 1329 nt7.42□□□□□ -1.22
RPB8P20436 YPT11YNL304W 1254 nt7.41□□□□□ -1.22
RPB8P20436 NAP1YKR048C 1254 nt7.4□□□□□ -1.22
RPB8P20436 TPO4YOR273C 1980 nt7.4□□□□□ -1.23
RPB8P20436 FRA1YLL029W 2250 nt7.39□□□□□ -1.23
RPB8P20436 ENO1YGR254W 1314 nt7.38□□□□□ -1.23
RPB8P20436 YBL095WYBL095W 813 nt7.38□□□□□ -1.23
RPB8P20436 PUP1YOR157C 786 nt7.38□□□□□ -1.23
RPB8P20436 URA8YJR103W 1737 nt7.38□□□□□ -1.23
RPB8P20436 GNP1YDR508C 1992 nt7.37□□□□□ -1.23
RPB8P20436 YHL008CYHL008C 1884 nt7.37□□□□□ -1.23
RPB8P20436 YCR025CYCR025C 411 nt7.35□□□□□ -1.23
RPB8P20436 YFR020WYFR020W 699 nt7.35□□□□□ -1.23
RPB8P20436 CYC3YAL039C 810 nt7.35□□□□□ -1.23
RPB8P20436 HMG2YLR450W 3138 nt7.34□□□□□ -1.23
RPB8P20436 LYS20YDL182W 1287 nt7.34□□□□□ -1.23
RPB8P20436 FET5YFL041W 1869 nt7.34□□□□□ -1.23
RPB8P20436 SRP102YKL154W 735 nt7.33□□□□□ -1.24
RPB8P20436 AAC3YBR085W 924 nt7.33□□□□□ -1.24
RPB8P20436 YMC2YBR104W 990 nt7.33□□□□□ -1.24
RPB8P20436 NBA1YOL070C 1506 nt7.32□□□□□ -1.24
RPB8P20436 YLR280CYLR280C 351 nt7.32□□□□□ -1.24
RPB8P20436 MTO1YGL236C 2010 nt7.32□□□□□ -1.24
RPB8P20436 RSM7YJR113C 744 nt7.31□□□□□ -1.24
RPB8P20436 AAT1YKL106W 1356 nt7.31□□□□□ -1.24
RPB8P20436 SER2YGR208W 930 nt7.3□□□□□ -1.24
RPB8P20436 MRS4YKR052C 915 nt7.3□□□□□ -1.24
RPB8P20436 SLG1YOR008C 1137 nt7.3□□□□□ -1.24
RPB8P20436 ERO1YML130C 1692 nt7.29□□□□□ -1.24
RPB8P20436 PAB1YER165W 1734 nt7.29□□□□□ -1.24
RPB8P20436 TMS1YDR105C 1422 nt7.28□□□□□ -1.24
RPB8P20436 NSG2YNL156C 900 nt7.28□□□□□ -1.24
RPB8P20436 TRP2YER090W 1524 nt7.27□□□□□ -1.25
RPB8P20436 TPN1YGL186C 1740 nt7.27□□□□□ -1.25
RPB8P20436 YLR072WYLR072W 2082 nt7.26□□□□□ -1.25
RPB8P20436 THI6YPL214C 1623 nt7.26□□□□□ -1.25
RPB8P20436 HTS1YPR033C 1641 nt7.26□□□□□ -1.25
RPB8P20436 SWM1YDR260C 513 nt7.25□□□□□ -1.25
RPB8P20436 HXT11YOL156W 1704 nt7.24□□□□□ -1.25
RPB8P20436 snR86snR86 1004 nt7.24□□□□□ -1.25
RPB8P20436 YGR210CYGR210C 1236 nt7.24□□□□□ -1.25
RPB8P20436 YBR056WYBR056W 1506 nt7.23□□□□□ -1.25
RPB8P20436 TGA1tA(UGC)A 73 nt7.23□□□□□ -1.25
RPB8P20436 tA(UGC)EtA(UGC)E 73 nt7.23□□□□□ -1.25
RPB8P20436 tA(UGC)GtA(UGC)G 73 nt7.23□□□□□ -1.25
RPB8P20436 tA(UGC)LtA(UGC)L 73 nt7.23□□□□□ -1.25
RPB8P20436 tA(UGC)OtA(UGC)O 73 nt7.23□□□□□ -1.25
RPB8P20436 EMC3YKL207W 762 nt7.23□□□□□ -1.25
RPB8P20436 SAM50YNL026W 1455 nt7.23□□□□□ -1.25
RPB8P20436 YCP4YCR004C 744 nt7.22□□□□□ -1.25
RPB8P20436 YIR035CYIR035C 765 nt7.22□□□□□ -1.25
RPB8P20436 RNA170RNA170 169 nt7.22□□□□□ -1.25
RPB8P20436 CSM2YIL132C 642 nt7.21□□□□□ -1.26
RPB8P20436 YJR149WYJR149W 1215 nt7.21□□□□□ -1.26
RPB8P20436 MET22YOL064C 1074 nt7.21□□□□□ -1.26
RPB8P20436 PUS7YOR243C 2031 nt7.2□□□□□ -1.26
RPB8P20436 YJL009WYJL009W 327 nt7.2□□□□□ -1.26
RPB8P20436 YLR460CYLR460C 1131 nt7.2□□□□□ -1.26
RPB8P20436 BUB2YMR055C 921 nt7.2□□□□□ -1.26
RPB8P20436 YPL108WYPL108W 507 nt7.2□□□□□ -1.26
RPB8P20436 MEP1YGR121C 1479 nt7.18□□□□□ -1.26
RPB8P20436 tD(GUC)BtD(GUC)B 72 nt7.18□□□□□ -1.26
RPB8P20436 tD(GUC)DtD(GUC)D 72 nt7.18□□□□□ -1.26
RPB8P20436 tD(GUC)G1tD(GUC)G1 72 nt7.18□□□□□ -1.26
RPB8P20436 tD(GUC)G2tD(GUC)G2 72 nt7.18□□□□□ -1.26
Retrieved 100 of 7,029 protein–RNA pairs in 82.2 ms