Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
COL11A2P13942 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.69■■■□□ 2.82
COL11A2P13942 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.68■■■□□ 2.82
COL11A2P13942 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.67■■■□□ 2.82
COL11A2P13942 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.67■■■□□ 2.82
COL11A2P13942 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
COL11A2P13942 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
COL11A2P13942 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
COL11A2P13942 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.65■■■□□ 2.82
COL11A2P13942 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
COL11A2P13942 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
COL11A2P13942 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC32.64■■■□□ 2.82
COL11A2P13942 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.82
COL11A2P13942 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
COL11A2P13942 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.64■■■□□ 2.82
COL11A2P13942 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
COL11A2P13942 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
COL11A2P13942 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
COL11A2P13942 RNF126P1-201ENST00000567452 1320 ntBASIC32.62■■■□□ 2.81
COL11A2P13942 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
COL11A2P13942 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
COL11A2P13942 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
COL11A2P13942 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
COL11A2P13942 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
COL11A2P13942 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
COL11A2P13942 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
COL11A2P13942 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC32.57■■■□□ 2.81
COL11A2P13942 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC32.57■■■□□ 2.8
COL11A2P13942 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.57■■■□□ 2.8
COL11A2P13942 NTF6A-201ENST00000591175 560 ntBASIC32.57■■■□□ 2.8
COL11A2P13942 CEP120-209ENST00000515110 606 ntTSL 3 BASIC32.56■■■□□ 2.8
COL11A2P13942 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
COL11A2P13942 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
COL11A2P13942 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
COL11A2P13942 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
COL11A2P13942 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
COL11A2P13942 AC012354.3-201ENST00000623734 483 ntBASIC32.54■■■□□ 2.8
COL11A2P13942 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.53■■■□□ 2.8
COL11A2P13942 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.53■■■□□ 2.8
COL11A2P13942 AC010864.1-201ENST00000609407 1511 ntBASIC32.53■■■□□ 2.8
COL11A2P13942 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC32.52■■■□□ 2.8
COL11A2P13942 AL161658.1-201ENST00000623641 1967 ntBASIC32.52■■■□□ 2.8
COL11A2P13942 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
COL11A2P13942 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
COL11A2P13942 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
COL11A2P13942 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.5■■■□□ 2.79
COL11A2P13942 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
COL11A2P13942 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
COL11A2P13942 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.49■■■□□ 2.79
COL11A2P13942 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.49■■■□□ 2.79
COL11A2P13942 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
COL11A2P13942 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
COL11A2P13942 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
COL11A2P13942 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
COL11A2P13942 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC32.47■■■□□ 2.79
COL11A2P13942 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
COL11A2P13942 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
COL11A2P13942 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
COL11A2P13942 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.46■■■□□ 2.79
COL11A2P13942 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
COL11A2P13942 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.46■■■□□ 2.79
COL11A2P13942 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
COL11A2P13942 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC32.45■■■□□ 2.79
COL11A2P13942 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.78
COL11A2P13942 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
COL11A2P13942 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
COL11A2P13942 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
COL11A2P13942 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC32.43■■■□□ 2.78
COL11A2P13942 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
COL11A2P13942 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
COL11A2P13942 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
COL11A2P13942 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
COL11A2P13942 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL11A2P13942 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
COL11A2P13942 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
COL11A2P13942 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
COL11A2P13942 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
COL11A2P13942 AC022413.1-201ENST00000624602 984 ntBASIC32.39■■■□□ 2.78
COL11A2P13942 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
COL11A2P13942 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL11A2P13942 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC32.37■■■□□ 2.77
COL11A2P13942 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
COL11A2P13942 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
COL11A2P13942 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC32.37■■■□□ 2.77
COL11A2P13942 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
COL11A2P13942 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
COL11A2P13942 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
COL11A2P13942 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.35■■■□□ 2.77
COL11A2P13942 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC32.35■■■□□ 2.77
COL11A2P13942 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
COL11A2P13942 WHAMMP2-203ENST00000563942 1603 ntBASIC32.34■■■□□ 2.77
COL11A2P13942 AC060814.1-201ENST00000554326 538 ntBASIC32.34■■■□□ 2.77
COL11A2P13942 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC32.33■■■□□ 2.77
COL11A2P13942 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.33■■■□□ 2.77
COL11A2P13942 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
COL11A2P13942 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
COL11A2P13942 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.32■■■□□ 2.76
COL11A2P13942 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
COL11A2P13942 AC008813.1-201ENST00000536597 885 ntBASIC32.32■■■□□ 2.76
COL11A2P13942 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms