Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTSDP07339 AP002365.1-201ENST00000603448 772 ntBASIC21.51■■□□□ 1.03
CTSDP07339 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.5■■□□□ 1.03
CTSDP07339 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.5■■□□□ 1.03
CTSDP07339 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.5■■□□□ 1.03
CTSDP07339 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTSDP07339 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTSDP07339 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.49■■□□□ 1.03
CTSDP07339 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.49■■□□□ 1.03
CTSDP07339 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTSDP07339 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CTSDP07339 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CTSDP07339 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.48■■□□□ 1.03
CTSDP07339 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTSDP07339 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CTSDP07339 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.46■■□□□ 1.03
CTSDP07339 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTSDP07339 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTSDP07339 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CTSDP07339 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTSDP07339 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CTSDP07339 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTSDP07339 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.44■■□□□ 1.02
CTSDP07339 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CTSDP07339 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.44■■□□□ 1.02
CTSDP07339 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTSDP07339 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTSDP07339 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.44■■□□□ 1.02
CTSDP07339 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTSDP07339 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTSDP07339 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CTSDP07339 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTSDP07339 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.43■■□□□ 1.02
CTSDP07339 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.43■■□□□ 1.02
CTSDP07339 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTSDP07339 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTSDP07339 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.42■■□□□ 1.02
CTSDP07339 AP004833.2-201ENST00000532228 1454 ntBASIC21.42■■□□□ 1.02
CTSDP07339 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CTSDP07339 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CTSDP07339 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTSDP07339 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTSDP07339 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CTSDP07339 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTSDP07339 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTSDP07339 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.4■■□□□ 1.02
CTSDP07339 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTSDP07339 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CTSDP07339 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
CTSDP07339 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.39■■□□□ 1.02
CTSDP07339 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CTSDP07339 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTSDP07339 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTSDP07339 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTSDP07339 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSDP07339 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSDP07339 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTSDP07339 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTSDP07339 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CTSDP07339 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.37■■□□□ 1.01
CTSDP07339 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CTSDP07339 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CTSDP07339 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CTSDP07339 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.34■■□□□ 1.01
CTSDP07339 AL133380.1-201ENST00000506013 324 ntBASIC21.34■■□□□ 1.01
CTSDP07339 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CTSDP07339 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.34■■□□□ 1.01
CTSDP07339 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.34■■□□□ 1.01
CTSDP07339 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CTSDP07339 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.33■■□□□ 1.01
CTSDP07339 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CTSDP07339 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTSDP07339 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CTSDP07339 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTSDP07339 LINC01003-201ENST00000564834 1764 ntBASIC21.31■■□□□ 1
CTSDP07339 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.31■■□□□ 1
CTSDP07339 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.31■■□□□ 1
CTSDP07339 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.31■■□□□ 1
CTSDP07339 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CTSDP07339 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CTSDP07339 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTSDP07339 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CTSDP07339 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CTSDP07339 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.29■■□□□ 1
CTSDP07339 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.29■■□□□ 1
CTSDP07339 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTSDP07339 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTSDP07339 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CTSDP07339 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
CTSDP07339 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.29■■□□□ 1
CTSDP07339 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.29■■□□□ 1
CTSDP07339 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.28■■□□□ 1
CTSDP07339 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.28■■□□□ 1
CTSDP07339 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTSDP07339 AC135731.1-201ENST00000569415 2548 ntBASIC21.28■■□□□ 1
CTSDP07339 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTSDP07339 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CTSDP07339 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CTSDP07339 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.27■■□□□ 1
CTSDP07339 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms