Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 ERG13YML126C 1476 nt8.86□□□□□ -0.99
RAD3P06839 NIF3YGL221C 867 nt8.86□□□□□ -0.99
RAD3P06839 YIA6YIL006W 1122 nt8.85□□□□□ -0.99
RAD3P06839 APS2YJR058C 444 nt8.85□□□□□ -0.99
RAD3P06839 SNX3YOR357C 489 nt8.85□□□□□ -0.99
RAD3P06839 HEM14YER014W 1620 nt8.83□□□□□ -1
RAD3P06839 DDI1YER143W 1287 nt8.83□□□□□ -1
RAD3P06839 LEU4YNL104C 1860 nt8.83□□□□□ -1
RAD3P06839 NSG2YNL156C 900 nt8.82□□□□□ -1
RAD3P06839 YCP4YCR004C 744 nt8.81□□□□□ -1
RAD3P06839 TMA23YMR269W 636 nt8.81□□□□□ -1
RAD3P06839 NPP2YEL016C 1482 nt8.81□□□□□ -1
RAD3P06839 THI6YPL214C 1623 nt8.8□□□□□ -1
RAD3P06839 PFS2YNL317W 1398 nt8.79□□□□□ -1
RAD3P06839 KRR1YCL059C 951 nt8.79□□□□□ -1
RAD3P06839 TRP2YER090W 1524 nt8.79□□□□□ -1
RAD3P06839 ERG6YML008C 1152 nt8.78□□□□□ -1
RAD3P06839 IGD1YFR017C 588 nt8.77□□□□□ -1.01
RAD3P06839 AIM34YMR003W 597 nt8.77□□□□□ -1.01
RAD3P06839 HSV2YGR223C 1347 nt8.77□□□□□ -1.01
RAD3P06839 SOD2YHR008C 702 nt8.76□□□□□ -1.01
RAD3P06839 ELO1YJL196C 933 nt8.76□□□□□ -1.01
RAD3P06839 IMO32YGR031W 1029 nt8.75□□□□□ -1.01
RAD3P06839 HXT11YOL156W 1704 nt8.74□□□□□ -1.01
RAD3P06839 YMR265CYMR265C 1386 nt8.73□□□□□ -1.01
RAD3P06839 SPS100YHR139C 981 nt8.73□□□□□ -1.01
RAD3P06839 RRT8YOL048C 1029 nt8.73□□□□□ -1.01
RAD3P06839 RTG2YGL252C 1767 nt8.73□□□□□ -1.01
RAD3P06839 FRT1YOR324C 1809 nt8.73□□□□□ -1.01
RAD3P06839 CDD1YLR245C 429 nt8.72□□□□□ -1.01
RAD3P06839 SUV3YPL029W 2214 nt8.71□□□□□ -1.02
RAD3P06839 CHA1YCL064C 1083 nt8.71□□□□□ -1.02
RAD3P06839 tE(CUC)DtE(CUC)D 72 nt8.71□□□□□ -1.02
RAD3P06839 tE(CUC)ItE(CUC)I 72 nt8.71□□□□□ -1.02
RAD3P06839 YDR467CYDR467C 327 nt8.71□□□□□ -1.02
RAD3P06839 YNR064CYNR064C 873 nt8.71□□□□□ -1.02
RAD3P06839 HAP5YOR358W 729 nt8.7□□□□□ -1.02
RAD3P06839 SRM1YGL097W 1449 nt8.7□□□□□ -1.02
RAD3P06839 GGC1YDL198C 903 nt8.69□□□□□ -1.02
RAD3P06839 SWM1YDR260C 513 nt8.68□□□□□ -1.02
RAD3P06839 IPL1YPL209C 1104 nt8.68□□□□□ -1.02
RAD3P06839 PMA2YPL036W 2844 nt8.68□□□□□ -1.02
RAD3P06839 SAM50YNL026W 1455 nt8.68□□□□□ -1.02
RAD3P06839 tA(AGC)DtA(AGC)D 73 nt8.67□□□□□ -1.02
RAD3P06839 tA(AGC)FtA(AGC)F 73 nt8.67□□□□□ -1.02
RAD3P06839 tA(AGC)GtA(AGC)G 73 nt8.67□□□□□ -1.02
RAD3P06839 tA(AGC)HtA(AGC)H 73 nt8.67□□□□□ -1.02
RAD3P06839 tA(AGC)JtA(AGC)J 73 nt8.67□□□□□ -1.02
RAD3P06839 tA(AGC)K1tA(AGC)K1 73 nt8.67□□□□□ -1.02
RAD3P06839 tA(AGC)K2tA(AGC)K2 73 nt8.67□□□□□ -1.02
RAD3P06839 tA(AGC)LtA(AGC)L 73 nt8.67□□□□□ -1.02
RAD3P06839 tA(AGC)M1tA(AGC)M1 73 nt8.67□□□□□ -1.02
RAD3P06839 tA(AGC)M2tA(AGC)M2 73 nt8.67□□□□□ -1.02
RAD3P06839 tA(AGC)PtA(AGC)P 73 nt8.67□□□□□ -1.02
RAD3P06839 FTH1YBR207W 1398 nt8.67□□□□□ -1.02
RAD3P06839 YER152W-AYER152W-A 567 nt8.66□□□□□ -1.02
RAD3P06839 SLM3YDL033C 1254 nt8.65□□□□□ -1.02
RAD3P06839 ADE8YDR408C 645 nt8.65□□□□□ -1.02
RAD3P06839 ITR1YDR497C 1755 nt8.65□□□□□ -1.02
RAD3P06839 CTF3YLR381W 2202 nt8.65□□□□□ -1.03
RAD3P06839 YCR025CYCR025C 411 nt8.64□□□□□ -1.03
RAD3P06839 YFR036W-AYFR036W-A 651 nt8.64□□□□□ -1.03
RAD3P06839 MDH2YOL126C 1134 nt8.64□□□□□ -1.03
RAD3P06839 TOP3YLR234W 1971 nt8.64□□□□□ -1.03
RAD3P06839 KEL3YPL263C 1956 nt8.64□□□□□ -1.03
RAD3P06839 ECM10YEL030W 1935 nt8.64□□□□□ -1.03
RAD3P06839 NDE1YMR145C 1683 nt8.63□□□□□ -1.03
RAD3P06839 RPN14YGL004C 1254 nt8.63□□□□□ -1.03
RAD3P06839 NAS2YIL007C 663 nt8.63□□□□□ -1.03
RAD3P06839 OPI3YJR073C 621 nt8.63□□□□□ -1.03
RAD3P06839 EMC3YKL207W 762 nt8.63□□□□□ -1.03
RAD3P06839 BEM1YBR200W 1656 nt8.62□□□□□ -1.03
RAD3P06839 GCD11YER025W 1584 nt8.62□□□□□ -1.03
RAD3P06839 PRC1YMR297W 1599 nt8.62□□□□□ -1.03
RAD3P06839 TVP23YDR084C 600 nt8.62□□□□□ -1.03
RAD3P06839 ATP10YLR393W 840 nt8.62□□□□□ -1.03
RAD3P06839 FSH2YMR222C 672 nt8.62□□□□□ -1.03
RAD3P06839 KRE1YNL322C 942 nt8.62□□□□□ -1.03
RAD3P06839 CRC1YOR100C 984 nt8.62□□□□□ -1.03
RAD3P06839 THP3YPR045C 1413 nt8.62□□□□□ -1.03
RAD3P06839 DIA4YHR011W 1341 nt8.61□□□□□ -1.03
RAD3P06839 ADE5,7YGL234W 2409 nt8.6□□□□□ -1.03
RAD3P06839 YLR173WYLR173W 1827 nt8.6□□□□□ -1.03
RAD3P06839 FLX1YIL134W 936 nt8.6□□□□□ -1.03
RAD3P06839 ABZ2YMR289W 1125 nt8.6□□□□□ -1.03
RAD3P06839 YRF1-1YDR545W 5391 nt8.59□□□□□ -1.03
RAD3P06839 YRF1-5YLR467W 5391 nt8.59□□□□□ -1.03
RAD3P06839 YRF1-8YOR396W 5391 nt8.59□□□□□ -1.03
RAD3P06839 GPM1YKL152C 744 nt8.59□□□□□ -1.03
RAD3P06839 YBL095WYBL095W 813 nt8.58□□□□□ -1.04
RAD3P06839 SPE4YLR146C 903 nt8.56□□□□□ -1.04
RAD3P06839 MET1YKR069W 1782 nt8.56□□□□□ -1.04
RAD3P06839 LYS20YDL182W 1287 nt8.55□□□□□ -1.04
RAD3P06839 YMR007WYMR007W 381 nt8.55□□□□□ -1.04
RAD3P06839 SWT21YNL187W 1074 nt8.55□□□□□ -1.04
RAD3P06839 AAT1YKL106W 1356 nt8.55□□□□□ -1.04
RAD3P06839 KGD2YDR148C 1392 nt8.53□□□□□ -1.04
RAD3P06839 YMR210WYMR210W 1350 nt8.53□□□□□ -1.04
RAD3P06839 snR31snR31 225 nt8.53□□□□□ -1.04
RAD3P06839 THI3YDL080C 1830 nt8.52□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms