Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
HLA-DOAP06340 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.98■■■□□ 2.55
HLA-DOAP06340 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.98■■■□□ 2.55
HLA-DOAP06340 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.98■■■□□ 2.55
HLA-DOAP06340 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
HLA-DOAP06340 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
HLA-DOAP06340 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
HLA-DOAP06340 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
HLA-DOAP06340 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.96■■■□□ 2.55
HLA-DOAP06340 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.95■■■□□ 2.55
HLA-DOAP06340 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
HLA-DOAP06340 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
HLA-DOAP06340 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.93■■■□□ 2.54
HLA-DOAP06340 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
HLA-DOAP06340 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
HLA-DOAP06340 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
HLA-DOAP06340 AL135925.1-201ENST00000605920 1701 ntBASIC30.91■■■□□ 2.54
HLA-DOAP06340 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
HLA-DOAP06340 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.89■■■□□ 2.54
HLA-DOAP06340 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
HLA-DOAP06340 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
HLA-DOAP06340 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
HLA-DOAP06340 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
HLA-DOAP06340 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
HLA-DOAP06340 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.86■■■□□ 2.53
HLA-DOAP06340 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.86■■■□□ 2.53
HLA-DOAP06340 AC127502.1-201ENST00000399971 1502 ntBASIC30.86■■■□□ 2.53
HLA-DOAP06340 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.86■■■□□ 2.53
HLA-DOAP06340 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.84■■■□□ 2.53
HLA-DOAP06340 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.84■■■□□ 2.53
HLA-DOAP06340 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
HLA-DOAP06340 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
HLA-DOAP06340 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.83■■■□□ 2.53
HLA-DOAP06340 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.83■■■□□ 2.53
HLA-DOAP06340 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
HLA-DOAP06340 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
HLA-DOAP06340 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
HLA-DOAP06340 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
HLA-DOAP06340 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
HLA-DOAP06340 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.8■■■□□ 2.52
HLA-DOAP06340 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
HLA-DOAP06340 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
HLA-DOAP06340 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.78■■■□□ 2.52
HLA-DOAP06340 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
HLA-DOAP06340 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
HLA-DOAP06340 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
HLA-DOAP06340 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HLA-DOAP06340 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.74■■■□□ 2.51
HLA-DOAP06340 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
HLA-DOAP06340 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
HLA-DOAP06340 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
HLA-DOAP06340 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.72■■■□□ 2.51
HLA-DOAP06340 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
HLA-DOAP06340 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
HLA-DOAP06340 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
HLA-DOAP06340 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
HLA-DOAP06340 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
HLA-DOAP06340 AC135983.2-203ENST00000454486 1613 ntBASIC30.7■■■□□ 2.51
HLA-DOAP06340 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
HLA-DOAP06340 HSD17B1P1-201ENST00000590052 955 ntBASIC30.68■■■□□ 2.5
HLA-DOAP06340 WHAMMP2-203ENST00000563942 1603 ntBASIC30.68■■■□□ 2.5
HLA-DOAP06340 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
HLA-DOAP06340 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
HLA-DOAP06340 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
HLA-DOAP06340 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.67■■■□□ 2.5
HLA-DOAP06340 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
HLA-DOAP06340 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.67■■■□□ 2.5
HLA-DOAP06340 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.66■■■□□ 2.5
HLA-DOAP06340 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
HLA-DOAP06340 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.65■■■□□ 2.5
HLA-DOAP06340 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
HLA-DOAP06340 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.64■■■□□ 2.5
HLA-DOAP06340 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
HLA-DOAP06340 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.64■■■□□ 2.5
HLA-DOAP06340 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
HLA-DOAP06340 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.63■■■□□ 2.49
HLA-DOAP06340 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
HLA-DOAP06340 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
HLA-DOAP06340 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
HLA-DOAP06340 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
HLA-DOAP06340 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
HLA-DOAP06340 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
HLA-DOAP06340 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
HLA-DOAP06340 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
HLA-DOAP06340 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
HLA-DOAP06340 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.62■■■□□ 2.49
HLA-DOAP06340 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
HLA-DOAP06340 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.61■■■□□ 2.49
HLA-DOAP06340 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
HLA-DOAP06340 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
HLA-DOAP06340 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
HLA-DOAP06340 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
HLA-DOAP06340 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
HLA-DOAP06340 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.59■■■□□ 2.49
HLA-DOAP06340 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
HLA-DOAP06340 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
HLA-DOAP06340 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.59■■■□□ 2.49
HLA-DOAP06340 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
HLA-DOAP06340 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HLA-DOAP06340 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms