Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
MT-ND3P03897 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
MT-ND3P03897 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
MT-ND3P03897 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MT-ND3P03897 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.79
MT-ND3P03897 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.79
MT-ND3P03897 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
MT-ND3P03897 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
MT-ND3P03897 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
MT-ND3P03897 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.2■■□□□ 1.78
MT-ND3P03897 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
MT-ND3P03897 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MT-ND3P03897 AL162393.1-201ENST00000437852 946 ntBASIC26.17■■□□□ 1.78
MT-ND3P03897 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
MT-ND3P03897 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MT-ND3P03897 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
MT-ND3P03897 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
MT-ND3P03897 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
MT-ND3P03897 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
MT-ND3P03897 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.12■■□□□ 1.77
MT-ND3P03897 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
MT-ND3P03897 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.12■■□□□ 1.77
MT-ND3P03897 AC010864.1-201ENST00000609407 1511 ntBASIC26.11■■□□□ 1.77
MT-ND3P03897 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.11■■□□□ 1.77
MT-ND3P03897 MIR3665-201ENST00000578708 105 ntBASIC26.11■■□□□ 1.77
MT-ND3P03897 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
MT-ND3P03897 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.09■■□□□ 1.77
MT-ND3P03897 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
MT-ND3P03897 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.09■■□□□ 1.77
MT-ND3P03897 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.09■■□□□ 1.77
MT-ND3P03897 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
MT-ND3P03897 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
MT-ND3P03897 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
MT-ND3P03897 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
MT-ND3P03897 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.07■■□□□ 1.76
MT-ND3P03897 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.07■■□□□ 1.76
MT-ND3P03897 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
MT-ND3P03897 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.07■■□□□ 1.76
MT-ND3P03897 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.07■■□□□ 1.76
MT-ND3P03897 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
MT-ND3P03897 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
MT-ND3P03897 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.06■■□□□ 1.76
MT-ND3P03897 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
MT-ND3P03897 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.06■■□□□ 1.76
MT-ND3P03897 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
MT-ND3P03897 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
MT-ND3P03897 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
MT-ND3P03897 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
MT-ND3P03897 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
MT-ND3P03897 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
MT-ND3P03897 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
MT-ND3P03897 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
MT-ND3P03897 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
MT-ND3P03897 AL121749.1-202ENST00000609313 2153 ntBASIC26.05■■□□□ 1.76
MT-ND3P03897 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
MT-ND3P03897 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
MT-ND3P03897 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
MT-ND3P03897 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
MT-ND3P03897 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
MT-ND3P03897 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
MT-ND3P03897 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
MT-ND3P03897 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
MT-ND3P03897 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
MT-ND3P03897 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
MT-ND3P03897 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
MT-ND3P03897 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.02■■□□□ 1.76
MT-ND3P03897 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
MT-ND3P03897 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.02■■□□□ 1.76
MT-ND3P03897 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
MT-ND3P03897 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
MT-ND3P03897 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.01■■□□□ 1.75
MT-ND3P03897 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26■■□□□ 1.75
MT-ND3P03897 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
MT-ND3P03897 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
MT-ND3P03897 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
MT-ND3P03897 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
MT-ND3P03897 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.97■■□□□ 1.75
MT-ND3P03897 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
MT-ND3P03897 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
MT-ND3P03897 MIR762-201ENST00000390236 83 ntBASIC25.96■■□□□ 1.75
MT-ND3P03897 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.96■■□□□ 1.75
MT-ND3P03897 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
MT-ND3P03897 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
MT-ND3P03897 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
MT-ND3P03897 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
MT-ND3P03897 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
MT-ND3P03897 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
MT-ND3P03897 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.94■■□□□ 1.74
MT-ND3P03897 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.94■■□□□ 1.74
MT-ND3P03897 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
MT-ND3P03897 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.92■■□□□ 1.74
MT-ND3P03897 AC005559.1-201ENST00000589661 871 ntBASIC25.92■■□□□ 1.74
MT-ND3P03897 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
MT-ND3P03897 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
MT-ND3P03897 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
MT-ND3P03897 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
MT-ND3P03897 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
MT-ND3P03897 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
MT-ND3P03897 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
MT-ND3P03897 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms