Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hbb-b1P02088 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hbb-b1P02088 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hbb-b1P02088 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hbb-b1P02088 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hbb-b1P02088 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hbb-b1P02088 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hbb-b1P02088 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.87■□□□□ 0.29
Hbb-b1P02088 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hbb-b1P02088 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.87■□□□□ 0.29
Hbb-b1P02088 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Hbb-b1P02088 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hbb-b1P02088 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hbb-b1P02088 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hbb-b1P02088 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hbb-b1P02088 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.85■□□□□ 0.29
Hbb-b1P02088 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hbb-b1P02088 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.85■□□□□ 0.29
Hbb-b1P02088 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hbb-b1P02088 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hbb-b1P02088 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hbb-b1P02088 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hbb-b1P02088 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hbb-b1P02088 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hbb-b1P02088 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hbb-b1P02088 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hbb-b1P02088 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hbb-b1P02088 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hbb-b1P02088 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hbb-b1P02088 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hbb-b1P02088 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hbb-b1P02088 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Hbb-b1P02088 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hbb-b1P02088 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.81■□□□□ 0.28
Hbb-b1P02088 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hbb-b1P02088 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hbb-b1P02088 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hbb-b1P02088 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hbb-b1P02088 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hbb-b1P02088 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hbb-b1P02088 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hbb-b1P02088 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hbb-b1P02088 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hbb-b1P02088 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hbb-b1P02088 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Hbb-b1P02088 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.79■□□□□ 0.28
Hbb-b1P02088 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.78■□□□□ 0.28
Hbb-b1P02088 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Hbb-b1P02088 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Hbb-b1P02088 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.78■□□□□ 0.28
Hbb-b1P02088 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hbb-b1P02088 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hbb-b1P02088 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hbb-b1P02088 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.77■□□□□ 0.28
Hbb-b1P02088 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Hbb-b1P02088 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hbb-b1P02088 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hbb-b1P02088 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Hbb-b1P02088 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hbb-b1P02088 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Hbb-b1P02088 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.76■□□□□ 0.27
Hbb-b1P02088 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hbb-b1P02088 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hbb-b1P02088 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hbb-b1P02088 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.75■□□□□ 0.27
Hbb-b1P02088 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hbb-b1P02088 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.75■□□□□ 0.27
Hbb-b1P02088 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hbb-b1P02088 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hbb-b1P02088 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hbb-b1P02088 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hbb-b1P02088 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hbb-b1P02088 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Hbb-b1P02088 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hbb-b1P02088 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hbb-b1P02088 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hbb-b1P02088 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hbb-b1P02088 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hbb-b1P02088 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hbb-b1P02088 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hbb-b1P02088 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hbb-b1P02088 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hbb-b1P02088 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hbb-b1P02088 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.71■□□□□ 0.27
Hbb-b1P02088 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Hbb-b1P02088 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hbb-b1P02088 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hbb-b1P02088 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hbb-b1P02088 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Hbb-b1P02088 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hbb-b1P02088 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hbb-b1P02088 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hbb-b1P02088 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hbb-b1P02088 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.7■□□□□ 0.26
Hbb-b1P02088 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.69■□□□□ 0.26
Hbb-b1P02088 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hbb-b1P02088 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hbb-b1P02088 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hbb-b1P02088 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.69■□□□□ 0.26
Hbb-b1P02088 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms