Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LTAP01374 WASH5P-204ENST00000632292 975 ntBASIC19.56■□□□□ 0.72
LTAP01374 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LTAP01374 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LTAP01374 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LTAP01374 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.55■□□□□ 0.72
LTAP01374 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LTAP01374 AC010864.1-201ENST00000609407 1511 ntBASIC19.55■□□□□ 0.72
LTAP01374 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTAP01374 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.54■□□□□ 0.72
LTAP01374 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.54■□□□□ 0.72
LTAP01374 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LTAP01374 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LTAP01374 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.53■□□□□ 0.72
LTAP01374 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.53■□□□□ 0.72
LTAP01374 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTAP01374 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTAP01374 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LTAP01374 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.53■□□□□ 0.72
LTAP01374 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.52■□□□□ 0.72
LTAP01374 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LTAP01374 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.52■□□□□ 0.72
LTAP01374 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LTAP01374 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.51■□□□□ 0.71
LTAP01374 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTAP01374 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTAP01374 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LTAP01374 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTAP01374 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LTAP01374 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTAP01374 AC135731.1-201ENST00000569415 2548 ntBASIC19.49■□□□□ 0.71
LTAP01374 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LTAP01374 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTAP01374 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.48■□□□□ 0.71
LTAP01374 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LTAP01374 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.48■□□□□ 0.71
LTAP01374 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
LTAP01374 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LTAP01374 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.47■□□□□ 0.71
LTAP01374 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.47■□□□□ 0.71
LTAP01374 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LTAP01374 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LTAP01374 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LTAP01374 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LTAP01374 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LTAP01374 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LTAP01374 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LTAP01374 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.45■□□□□ 0.7
LTAP01374 AP004833.2-201ENST00000532228 1454 ntBASIC19.45■□□□□ 0.7
LTAP01374 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LTAP01374 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LTAP01374 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LTAP01374 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LTAP01374 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
LTAP01374 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LTAP01374 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LTAP01374 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LTAP01374 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LTAP01374 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LTAP01374 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LTAP01374 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LTAP01374 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LTAP01374 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LTAP01374 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LTAP01374 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.41■□□□□ 0.7
LTAP01374 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LTAP01374 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LTAP01374 LINC01003-201ENST00000564834 1764 ntBASIC19.4■□□□□ 0.7
LTAP01374 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LTAP01374 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LTAP01374 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LTAP01374 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LTAP01374 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.39■□□□□ 0.7
LTAP01374 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.39■□□□□ 0.7
LTAP01374 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LTAP01374 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LTAP01374 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.39■□□□□ 0.69
LTAP01374 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTAP01374 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.38■□□□□ 0.69
LTAP01374 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTAP01374 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LTAP01374 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.38■□□□□ 0.69
LTAP01374 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LTAP01374 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTAP01374 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTAP01374 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.37■□□□□ 0.69
LTAP01374 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.36■□□□□ 0.69
LTAP01374 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.36■□□□□ 0.69
LTAP01374 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.36■□□□□ 0.69
LTAP01374 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
LTAP01374 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LTAP01374 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTAP01374 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LTAP01374 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTAP01374 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTAP01374 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.35■□□□□ 0.69
LTAP01374 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
LTAP01374 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LTAP01374 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LTAP01374 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms