Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.01■□□□□ 0.95
Slc28a2O88627 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc28a2O88627 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Slc28a2O88627 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc28a2O88627 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc28a2O88627 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc28a2O88627 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc28a2O88627 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc28a2O88627 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc28a2O88627 Gm9397-201ENSMUST00000200125 605 ntBASIC20.99■□□□□ 0.95
Slc28a2O88627 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc28a2O88627 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc28a2O88627 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Slc28a2O88627 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc28a2O88627 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc28a2O88627 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.96■□□□□ 0.95
Slc28a2O88627 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.96■□□□□ 0.95
Slc28a2O88627 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc28a2O88627 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.95■□□□□ 0.94
Slc28a2O88627 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.95■□□□□ 0.94
Slc28a2O88627 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Slc28a2O88627 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc28a2O88627 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Slc28a2O88627 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc28a2O88627 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc28a2O88627 Gm45855-201ENSMUST00000212546 880 ntBASIC20.93■□□□□ 0.94
Slc28a2O88627 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc28a2O88627 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc28a2O88627 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Slc28a2O88627 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a2O88627 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a2O88627 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a2O88627 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.92■□□□□ 0.94
Slc28a2O88627 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a2O88627 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Slc28a2O88627 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Slc28a2O88627 Gm24970-201ENSMUST00000175582 82 ntBASIC20.91■□□□□ 0.94
Slc28a2O88627 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc28a2O88627 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc28a2O88627 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc28a2O88627 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.9■□□□□ 0.94
Slc28a2O88627 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Slc28a2O88627 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Slc28a2O88627 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc28a2O88627 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc28a2O88627 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc28a2O88627 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Slc28a2O88627 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc28a2O88627 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Slc28a2O88627 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.89■□□□□ 0.93
Slc28a2O88627 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc28a2O88627 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc28a2O88627 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc28a2O88627 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc28a2O88627 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc28a2O88627 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a2O88627 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a2O88627 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc28a2O88627 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Slc28a2O88627 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.85■□□□□ 0.93
Slc28a2O88627 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.85■□□□□ 0.93
Slc28a2O88627 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Slc28a2O88627 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc28a2O88627 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc28a2O88627 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc28a2O88627 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc28a2O88627 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc28a2O88627 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Slc28a2O88627 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc28a2O88627 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc28a2O88627 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Slc28a2O88627 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc28a2O88627 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc28a2O88627 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc28a2O88627 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc28a2O88627 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc28a2O88627 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Slc28a2O88627 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc28a2O88627 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc28a2O88627 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Slc28a2O88627 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc28a2O88627 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Slc28a2O88627 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc28a2O88627 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc28a2O88627 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc28a2O88627 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.78■□□□□ 0.92
Slc28a2O88627 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc28a2O88627 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc28a2O88627 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc28a2O88627 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Slc28a2O88627 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc28a2O88627 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc28a2O88627 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Slc28a2O88627 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms