Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Slc6a20bO88575 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Slc6a20bO88575 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
Slc6a20bO88575 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Slc6a20bO88575 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.89■■□□□ 1.9
Slc6a20bO88575 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Slc6a20bO88575 Particl-201ENSMUST00000205370 1560 ntBASIC26.89■■□□□ 1.9
Slc6a20bO88575 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Slc6a20bO88575 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Slc6a20bO88575 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Slc6a20bO88575 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
Slc6a20bO88575 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Slc6a20bO88575 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Slc6a20bO88575 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.87■■□□□ 1.89
Slc6a20bO88575 Gm12366-201ENSMUST00000121722 873 ntBASIC26.87■■□□□ 1.89
Slc6a20bO88575 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.87■■□□□ 1.89
Slc6a20bO88575 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Slc6a20bO88575 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.87■■□□□ 1.89
Slc6a20bO88575 Gm5786-201ENSMUST00000085368 882 ntBASIC26.87■■□□□ 1.89
Slc6a20bO88575 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Slc6a20bO88575 Scarna2-201ENSMUST00000157560 414 ntBASIC26.86■■□□□ 1.89
Slc6a20bO88575 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Slc6a20bO88575 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Slc6a20bO88575 Gm30023-201ENSMUST00000197970 889 ntBASIC26.84■■□□□ 1.89
Slc6a20bO88575 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Slc6a20bO88575 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Slc6a20bO88575 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.83■■□□□ 1.89
Slc6a20bO88575 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Slc6a20bO88575 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Slc6a20bO88575 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Slc6a20bO88575 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.81■■□□□ 1.88
Slc6a20bO88575 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Slc6a20bO88575 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Slc6a20bO88575 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Slc6a20bO88575 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Slc6a20bO88575 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Slc6a20bO88575 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Slc6a20bO88575 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Slc6a20bO88575 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Slc6a20bO88575 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Slc6a20bO88575 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Slc6a20bO88575 Gm11687-201ENSMUST00000118911 886 ntBASIC26.77■■□□□ 1.88
Slc6a20bO88575 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Slc6a20bO88575 Gm9806-201ENSMUST00000051080 552 ntBASIC26.75■■□□□ 1.87
Slc6a20bO88575 Gm4799-201ENSMUST00000095396 657 ntBASIC26.75■■□□□ 1.87
Slc6a20bO88575 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
Slc6a20bO88575 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Slc6a20bO88575 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Slc6a20bO88575 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Slc6a20bO88575 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.73■■□□□ 1.87
Slc6a20bO88575 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.73■■□□□ 1.87
Slc6a20bO88575 Gm16437-201ENSMUST00000025669 507 ntBASIC26.73■■□□□ 1.87
Slc6a20bO88575 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Slc6a20bO88575 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Slc6a20bO88575 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.72■■□□□ 1.87
Slc6a20bO88575 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Slc6a20bO88575 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Slc6a20bO88575 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Slc6a20bO88575 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Slc6a20bO88575 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Slc6a20bO88575 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.66■■□□□ 1.86
Slc6a20bO88575 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.66■■□□□ 1.86
Slc6a20bO88575 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.65■■□□□ 1.86
Slc6a20bO88575 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
Slc6a20bO88575 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Slc6a20bO88575 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Slc6a20bO88575 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Slc6a20bO88575 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.63■■□□□ 1.85
Slc6a20bO88575 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Slc6a20bO88575 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.61■■□□□ 1.85
Slc6a20bO88575 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Slc6a20bO88575 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.59■■□□□ 1.85
Slc6a20bO88575 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.59■■□□□ 1.85
Slc6a20bO88575 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Slc6a20bO88575 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Slc6a20bO88575 Gm7332-201ENSMUST00000118351 454 ntBASIC26.58■■□□□ 1.85
Slc6a20bO88575 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Slc6a20bO88575 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.57■■□□□ 1.84
Slc6a20bO88575 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Slc6a20bO88575 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Slc6a20bO88575 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.56■■□□□ 1.84
Slc6a20bO88575 Gm27502-201ENSMUST00000183495 199 ntBASIC26.55■■□□□ 1.84
Slc6a20bO88575 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Slc6a20bO88575 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Slc6a20bO88575 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Slc6a20bO88575 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Slc6a20bO88575 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Slc6a20bO88575 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
Slc6a20bO88575 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
Slc6a20bO88575 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Slc6a20bO88575 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Slc6a20bO88575 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Slc6a20bO88575 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Slc6a20bO88575 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Slc6a20bO88575 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Slc6a20bO88575 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.51■■□□□ 1.83
Slc6a20bO88575 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Slc6a20bO88575 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Slc6a20bO88575 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.5■■□□□ 1.83
Slc6a20bO88575 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms