Protein–RNA interactions for Protein: O88572

Lrp6, Low-density lipoprotein receptor-related protein 6, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp6O88572 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Lrp6O88572 Gm27502-201ENSMUST00000183495 199 ntBASIC32.77■■■□□ 2.84
Lrp6O88572 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
Lrp6O88572 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Lrp6O88572 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC32.74■■■□□ 2.83
Lrp6O88572 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Lrp6O88572 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC32.73■■■□□ 2.83
Lrp6O88572 Gm7332-201ENSMUST00000118351 454 ntBASIC32.73■■■□□ 2.83
Lrp6O88572 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Lrp6O88572 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
Lrp6O88572 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Lrp6O88572 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
Lrp6O88572 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Lrp6O88572 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Lrp6O88572 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Lrp6O88572 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.68■■■□□ 2.82
Lrp6O88572 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Lrp6O88572 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
Lrp6O88572 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Lrp6O88572 Gm5812-201ENSMUST00000061073 957 ntBASIC32.67■■■□□ 2.82
Lrp6O88572 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Lrp6O88572 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Lrp6O88572 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC32.65■■■□□ 2.82
Lrp6O88572 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Lrp6O88572 Gm16437-201ENSMUST00000025669 507 ntBASIC32.65■■■□□ 2.82
Lrp6O88572 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Lrp6O88572 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Lrp6O88572 Particl-201ENSMUST00000205370 1560 ntBASIC32.63■■■□□ 2.81
Lrp6O88572 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
Lrp6O88572 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Lrp6O88572 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
Lrp6O88572 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
Lrp6O88572 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Lrp6O88572 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC32.59■■■□□ 2.81
Lrp6O88572 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Lrp6O88572 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC32.59■■■□□ 2.81
Lrp6O88572 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Lrp6O88572 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Lrp6O88572 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Lrp6O88572 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Lrp6O88572 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Lrp6O88572 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Lrp6O88572 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Lrp6O88572 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Lrp6O88572 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Lrp6O88572 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Lrp6O88572 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Lrp6O88572 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Lrp6O88572 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC32.48■■■□□ 2.79
Lrp6O88572 Pkd1-207ENSMUST00000228550 1050 ntBASIC32.48■■■□□ 2.79
Lrp6O88572 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Lrp6O88572 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
Lrp6O88572 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
Lrp6O88572 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Lrp6O88572 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Lrp6O88572 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Lrp6O88572 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Lrp6O88572 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.45■■■□□ 2.78
Lrp6O88572 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC32.44■■■□□ 2.78
Lrp6O88572 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Lrp6O88572 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC32.44■■■□□ 2.78
Lrp6O88572 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC32.44■■■□□ 2.78
Lrp6O88572 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Lrp6O88572 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Lrp6O88572 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Lrp6O88572 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC32.41■■■□□ 2.78
Lrp6O88572 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Lrp6O88572 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Lrp6O88572 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Lrp6O88572 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC32.4■■■□□ 2.78
Lrp6O88572 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Lrp6O88572 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
Lrp6O88572 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Lrp6O88572 Gm14523-201ENSMUST00000117260 558 ntBASIC32.37■■■□□ 2.77
Lrp6O88572 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Lrp6O88572 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Lrp6O88572 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Lrp6O88572 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
Lrp6O88572 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Lrp6O88572 Gm45364-201ENSMUST00000210883 159 ntBASIC32.31■■■□□ 2.76
Lrp6O88572 AC154454.1-201ENSMUST00000225253 216 ntBASIC32.31■■■□□ 2.76
Lrp6O88572 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Lrp6O88572 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC32.29■■■□□ 2.76
Lrp6O88572 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC32.29■■■□□ 2.76
Lrp6O88572 Gm30023-201ENSMUST00000197970 889 ntBASIC32.29■■■□□ 2.76
Lrp6O88572 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Lrp6O88572 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Lrp6O88572 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Lrp6O88572 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC32.28■■■□□ 2.76
Lrp6O88572 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.76
Lrp6O88572 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Lrp6O88572 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Lrp6O88572 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Lrp6O88572 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Lrp6O88572 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Lrp6O88572 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC32.22■■■□□ 2.75
Lrp6O88572 Gm5921-201ENSMUST00000075898 882 ntBASIC32.22■■■□□ 2.75
Lrp6O88572 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Lrp6O88572 Gm5067-201ENSMUST00000170449 1009 ntBASIC32.21■■■□□ 2.75
Lrp6O88572 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms