Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.24■■■□□ 2.43
CDKL5O76039 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CDKL5O76039 AC108673.1-201ENST00000510422 1159 ntBASIC30.24■■■□□ 2.43
CDKL5O76039 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.24■■■□□ 2.43
CDKL5O76039 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
CDKL5O76039 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.21■■■□□ 2.43
CDKL5O76039 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CDKL5O76039 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CDKL5O76039 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.2■■■□□ 2.43
CDKL5O76039 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDKL5O76039 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CDKL5O76039 AL162393.1-201ENST00000437852 946 ntBASIC30.18■■■□□ 2.42
CDKL5O76039 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CDKL5O76039 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.17■■■□□ 2.42
CDKL5O76039 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CDKL5O76039 AP004833.2-201ENST00000532228 1454 ntBASIC30.17■■■□□ 2.42
CDKL5O76039 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.17■■■□□ 2.42
CDKL5O76039 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CDKL5O76039 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.15■■■□□ 2.42
CDKL5O76039 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CDKL5O76039 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CDKL5O76039 AC087741.3-201ENST00000624270 1347 ntBASIC30.15■■■□□ 2.42
CDKL5O76039 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.15■■■□□ 2.42
CDKL5O76039 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CDKL5O76039 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CDKL5O76039 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CDKL5O76039 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.12■■■□□ 2.41
CDKL5O76039 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CDKL5O76039 MIR6090-201ENST00000622481 60 ntBASIC30.12■■■□□ 2.41
CDKL5O76039 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDKL5O76039 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDKL5O76039 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CDKL5O76039 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
CDKL5O76039 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CDKL5O76039 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CDKL5O76039 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.1■■■□□ 2.41
CDKL5O76039 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDKL5O76039 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CDKL5O76039 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CDKL5O76039 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.07■■■□□ 2.4
CDKL5O76039 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDKL5O76039 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDKL5O76039 AC044849.2-201ENST00000606596 710 ntBASIC30.06■■■□□ 2.4
CDKL5O76039 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.05■■■□□ 2.4
CDKL5O76039 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
CDKL5O76039 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.04■■■□□ 2.4
CDKL5O76039 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
CDKL5O76039 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CDKL5O76039 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.03■■■□□ 2.4
CDKL5O76039 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDKL5O76039 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CDKL5O76039 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.02■■■□□ 2.4
CDKL5O76039 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.01■■■□□ 2.4
CDKL5O76039 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.01■■■□□ 2.39
CDKL5O76039 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
CDKL5O76039 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30■■■□□ 2.39
CDKL5O76039 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
CDKL5O76039 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CDKL5O76039 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CDKL5O76039 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
CDKL5O76039 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.98■■■□□ 2.39
CDKL5O76039 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CDKL5O76039 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.97■■■□□ 2.39
CDKL5O76039 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CDKL5O76039 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CDKL5O76039 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CDKL5O76039 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CDKL5O76039 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
CDKL5O76039 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
CDKL5O76039 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CDKL5O76039 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.94■■■□□ 2.38
CDKL5O76039 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.94■■■□□ 2.38
CDKL5O76039 DRD5P2-201ENST00000421395 2012 ntBASIC29.94■■■□□ 2.38
CDKL5O76039 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.94■■■□□ 2.38
CDKL5O76039 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CDKL5O76039 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.93■■■□□ 2.38
CDKL5O76039 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CDKL5O76039 AC142086.6-201ENST00000621154 1765 ntBASIC29.92■■■□□ 2.38
CDKL5O76039 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
CDKL5O76039 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDKL5O76039 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.91■■■□□ 2.38
CDKL5O76039 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.91■■■□□ 2.38
CDKL5O76039 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CDKL5O76039 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDKL5O76039 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDKL5O76039 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
CDKL5O76039 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.9■■■□□ 2.38
CDKL5O76039 LINC00273-201ENST00000539813 1452 ntBASIC29.9■■■□□ 2.38
CDKL5O76039 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
CDKL5O76039 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CDKL5O76039 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDKL5O76039 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.89■■■□□ 2.38
CDKL5O76039 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.89■■■□□ 2.38
CDKL5O76039 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDKL5O76039 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CDKL5O76039 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDKL5O76039 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDKL5O76039 AC135983.2-203ENST00000454486 1613 ntBASIC29.88■■■□□ 2.37
CDKL5O76039 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CDKL5O76039 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms