Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.32■□□□□ 0.68
SH2D1AO60880 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D1AO60880 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D1AO60880 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D1AO60880 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SH2D1AO60880 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SH2D1AO60880 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D1AO60880 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D1AO60880 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SH2D1AO60880 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SH2D1AO60880 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D1AO60880 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D1AO60880 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SH2D1AO60880 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D1AO60880 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SH2D1AO60880 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D1AO60880 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D1AO60880 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D1AO60880 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.28■□□□□ 0.68
SH2D1AO60880 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SH2D1AO60880 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.27■□□□□ 0.68
SH2D1AO60880 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SH2D1AO60880 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SH2D1AO60880 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SH2D1AO60880 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH2D1AO60880 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SH2D1AO60880 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SH2D1AO60880 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.26■□□□□ 0.67
SH2D1AO60880 BX255925.1-201ENST00000566954 1854 ntBASIC19.26■□□□□ 0.67
SH2D1AO60880 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SH2D1AO60880 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SH2D1AO60880 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH2D1AO60880 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.25■□□□□ 0.67
SH2D1AO60880 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.25■□□□□ 0.67
SH2D1AO60880 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SH2D1AO60880 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SH2D1AO60880 AL133380.1-201ENST00000506013 324 ntBASIC19.23■□□□□ 0.67
SH2D1AO60880 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SH2D1AO60880 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.23■□□□□ 0.67
SH2D1AO60880 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D1AO60880 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SH2D1AO60880 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SH2D1AO60880 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.21■□□□□ 0.67
SH2D1AO60880 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.21■□□□□ 0.67
SH2D1AO60880 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.21■□□□□ 0.67
SH2D1AO60880 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D1AO60880 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D1AO60880 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH2D1AO60880 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SH2D1AO60880 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SH2D1AO60880 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.2■□□□□ 0.66
SH2D1AO60880 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D1AO60880 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH2D1AO60880 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.19■□□□□ 0.66
SH2D1AO60880 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.19■□□□□ 0.66
SH2D1AO60880 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D1AO60880 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SH2D1AO60880 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SH2D1AO60880 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D1AO60880 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SH2D1AO60880 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.18■□□□□ 0.66
SH2D1AO60880 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D1AO60880 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D1AO60880 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D1AO60880 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.17■□□□□ 0.66
SH2D1AO60880 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.17■□□□□ 0.66
SH2D1AO60880 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D1AO60880 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SH2D1AO60880 AP004833.2-201ENST00000532228 1454 ntBASIC19.16■□□□□ 0.66
SH2D1AO60880 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SH2D1AO60880 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SH2D1AO60880 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SH2D1AO60880 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.15■□□□□ 0.66
SH2D1AO60880 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D1AO60880 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SH2D1AO60880 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D1AO60880 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D1AO60880 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.15■□□□□ 0.66
SH2D1AO60880 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SH2D1AO60880 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.14■□□□□ 0.66
SH2D1AO60880 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
SH2D1AO60880 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D1AO60880 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SH2D1AO60880 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SH2D1AO60880 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.14■□□□□ 0.65
SH2D1AO60880 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SH2D1AO60880 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SH2D1AO60880 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SH2D1AO60880 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SH2D1AO60880 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SH2D1AO60880 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D1AO60880 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.12■□□□□ 0.65
SH2D1AO60880 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D1AO60880 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.12■□□□□ 0.65
SH2D1AO60880 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SH2D1AO60880 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D1AO60880 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D1AO60880 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.11■□□□□ 0.65
SH2D1AO60880 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SH2D1AO60880 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms