Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
Col15a1O35206 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Col15a1O35206 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
Col15a1O35206 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Col15a1O35206 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.79■■■□□ 2.68
Col15a1O35206 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
Col15a1O35206 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.78■■■□□ 2.68
Col15a1O35206 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Col15a1O35206 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC31.76■■■□□ 2.67
Col15a1O35206 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.76■■■□□ 2.67
Col15a1O35206 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Col15a1O35206 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Col15a1O35206 Gm6311-201ENSMUST00000073790 878 ntBASIC31.75■■■□□ 2.67
Col15a1O35206 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Col15a1O35206 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Col15a1O35206 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Col15a1O35206 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
Col15a1O35206 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Col15a1O35206 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.72■■■□□ 2.67
Col15a1O35206 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31.71■■■□□ 2.67
Col15a1O35206 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Col15a1O35206 Particl-201ENSMUST00000205370 1560 ntBASIC31.71■■■□□ 2.67
Col15a1O35206 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Col15a1O35206 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
Col15a1O35206 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.71■■■□□ 2.67
Col15a1O35206 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Col15a1O35206 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Col15a1O35206 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Col15a1O35206 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.67■■■□□ 2.66
Col15a1O35206 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Col15a1O35206 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Col15a1O35206 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Col15a1O35206 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Col15a1O35206 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Col15a1O35206 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31.61■■■□□ 2.65
Col15a1O35206 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Col15a1O35206 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Col15a1O35206 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Col15a1O35206 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
Col15a1O35206 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Col15a1O35206 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Col15a1O35206 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Col15a1O35206 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
Col15a1O35206 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
Col15a1O35206 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC31.56■■■□□ 2.64
Col15a1O35206 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Col15a1O35206 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Col15a1O35206 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Col15a1O35206 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Col15a1O35206 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC31.53■■■□□ 2.64
Col15a1O35206 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Col15a1O35206 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Col15a1O35206 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Col15a1O35206 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Col15a1O35206 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Col15a1O35206 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Col15a1O35206 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.5■■■□□ 2.63
Col15a1O35206 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Col15a1O35206 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Col15a1O35206 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Col15a1O35206 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
Col15a1O35206 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Col15a1O35206 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Col15a1O35206 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Col15a1O35206 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Col15a1O35206 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31.46■■■□□ 2.63
Col15a1O35206 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
Col15a1O35206 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Col15a1O35206 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Col15a1O35206 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Col15a1O35206 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Col15a1O35206 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Col15a1O35206 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Col15a1O35206 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Col15a1O35206 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Col15a1O35206 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Col15a1O35206 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
Col15a1O35206 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Col15a1O35206 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Col15a1O35206 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Col15a1O35206 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC31.38■■■□□ 2.61
Col15a1O35206 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Col15a1O35206 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Col15a1O35206 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Col15a1O35206 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.36■■■□□ 2.61
Col15a1O35206 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Col15a1O35206 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Col15a1O35206 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Col15a1O35206 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Col15a1O35206 Scarna2-201ENSMUST00000157560 414 ntBASIC31.34■■■□□ 2.61
Col15a1O35206 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Col15a1O35206 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Col15a1O35206 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC31.31■■■□□ 2.6
Col15a1O35206 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Col15a1O35206 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31.29■■■□□ 2.6
Col15a1O35206 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Col15a1O35206 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Col15a1O35206 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31.27■■■□□ 2.6
Col15a1O35206 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC31.27■■■□□ 2.6
Col15a1O35206 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms