Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC33.37■■■□□ 2.93
ABCC4O15439 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC33.36■■■□□ 2.93
ABCC4O15439 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC33.36■■■□□ 2.93
ABCC4O15439 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
ABCC4O15439 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC33.35■■■□□ 2.93
ABCC4O15439 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
ABCC4O15439 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC33.34■■■□□ 2.93
ABCC4O15439 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC33.34■■■□□ 2.93
ABCC4O15439 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
ABCC4O15439 MIR4449-201ENST00000578365 66 ntBASIC33.33■■■□□ 2.93
ABCC4O15439 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC33.33■■■□□ 2.93
ABCC4O15439 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
ABCC4O15439 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
ABCC4O15439 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
ABCC4O15439 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
ABCC4O15439 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.92
ABCC4O15439 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC33.31■■■□□ 2.92
ABCC4O15439 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
ABCC4O15439 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.92
ABCC4O15439 MIR639-201ENST00000384974 98 ntBASIC33.3■■■□□ 2.92
ABCC4O15439 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
ABCC4O15439 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC33.29■■■□□ 2.92
ABCC4O15439 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC33.29■■■□□ 2.92
ABCC4O15439 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC33.29■■■□□ 2.92
ABCC4O15439 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC33.29■■■□□ 2.92
ABCC4O15439 RNF166-209ENST00000567844 633 ntTSL 5 BASIC33.29■■■□□ 2.92
ABCC4O15439 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
ABCC4O15439 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC33.29■■■□□ 2.92
ABCC4O15439 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
ABCC4O15439 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
ABCC4O15439 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC33.27■■■□□ 2.92
ABCC4O15439 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
ABCC4O15439 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
ABCC4O15439 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
ABCC4O15439 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
ABCC4O15439 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC33.26■■■□□ 2.91
ABCC4O15439 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC33.26■■■□□ 2.91
ABCC4O15439 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC33.25■■■□□ 2.91
ABCC4O15439 MIR3648-2-201ENST00000581792 180 ntBASIC33.25■■■□□ 2.91
ABCC4O15439 MIR3648-1-201ENST00000615959 180 ntBASIC33.25■■■□□ 2.91
ABCC4O15439 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
ABCC4O15439 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
ABCC4O15439 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
ABCC4O15439 AC016575.1-201ENST00000607026 382 ntBASIC33.23■■■□□ 2.91
ABCC4O15439 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC33.22■■■□□ 2.91
ABCC4O15439 GDI1-215ENST00000630693 786 ntTSL 4 BASIC33.22■■■□□ 2.91
ABCC4O15439 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
ABCC4O15439 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
ABCC4O15439 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
ABCC4O15439 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC33.2■■■□□ 2.91
ABCC4O15439 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
ABCC4O15439 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC33.2■■■□□ 2.9
ABCC4O15439 LINC01971-201ENST00000617888 1048 ntBASIC33.19■■■□□ 2.9
ABCC4O15439 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
ABCC4O15439 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
ABCC4O15439 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC33.19■■■□□ 2.9
ABCC4O15439 ABCB10P3-201ENST00000561950 2166 ntBASIC33.19■■■□□ 2.9
ABCC4O15439 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
ABCC4O15439 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
ABCC4O15439 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC33.18■■■□□ 2.9
ABCC4O15439 DUX4L11-201ENST00000611504 1267 ntBASIC33.18■■■□□ 2.9
ABCC4O15439 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
ABCC4O15439 DUX4L12-201ENST00000614593 1267 ntBASIC33.18■■■□□ 2.9
ABCC4O15439 DUX4L14-201ENST00000621227 1267 ntBASIC33.18■■■□□ 2.9
ABCC4O15439 CR559946.2-201ENST00000623684 991 ntBASIC33.18■■■□□ 2.9
ABCC4O15439 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC33.18■■■□□ 2.9
ABCC4O15439 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC33.16■■■□□ 2.9
ABCC4O15439 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
ABCC4O15439 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
ABCC4O15439 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
ABCC4O15439 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
ABCC4O15439 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC33.14■■■□□ 2.9
ABCC4O15439 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
ABCC4O15439 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
ABCC4O15439 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33.12■■■□□ 2.89
ABCC4O15439 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC33.11■■■□□ 2.89
ABCC4O15439 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC33.11■■■□□ 2.89
ABCC4O15439 AC127502.1-201ENST00000399971 1502 ntBASIC33.11■■■□□ 2.89
ABCC4O15439 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC33.1■■■□□ 2.89
ABCC4O15439 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC33.1■■■□□ 2.89
ABCC4O15439 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
ABCC4O15439 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
ABCC4O15439 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
ABCC4O15439 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC33.08■■■□□ 2.89
ABCC4O15439 AGPS-202ENST00000409888 815 ntTSL 4 BASIC33.07■■■□□ 2.88
ABCC4O15439 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC33.07■■■□□ 2.88
ABCC4O15439 AL139393.2-201ENST00000608721 2025 ntBASIC33.05■■■□□ 2.88
ABCC4O15439 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
ABCC4O15439 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
ABCC4O15439 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC33.04■■■□□ 2.88
ABCC4O15439 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.04■■■□□ 2.88
ABCC4O15439 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
ABCC4O15439 AC139426.1-201ENST00000568218 2529 ntBASIC33.04■■■□□ 2.88
ABCC4O15439 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
ABCC4O15439 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
ABCC4O15439 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC33.02■■■□□ 2.88
ABCC4O15439 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC33.02■■■□□ 2.88
ABCC4O15439 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
ABCC4O15439 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
ABCC4O15439 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms