Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
ATP2A1O14983 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
ATP2A1O14983 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.05■■■□□ 2.4
ATP2A1O14983 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
ATP2A1O14983 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ATP2A1O14983 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
ATP2A1O14983 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ATP2A1O14983 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ATP2A1O14983 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ATP2A1O14983 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ATP2A1O14983 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.02■■■□□ 2.4
ATP2A1O14983 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
ATP2A1O14983 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ATP2A1O14983 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
ATP2A1O14983 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ATP2A1O14983 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ATP2A1O14983 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
ATP2A1O14983 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
ATP2A1O14983 HSD17B1P1-201ENST00000590052 955 ntBASIC29.99■■■□□ 2.39
ATP2A1O14983 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
ATP2A1O14983 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ATP2A1O14983 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
ATP2A1O14983 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.98■■■□□ 2.39
ATP2A1O14983 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ATP2A1O14983 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ATP2A1O14983 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.93■■■□□ 2.38
ATP2A1O14983 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.92■■■□□ 2.38
ATP2A1O14983 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.92■■■□□ 2.38
ATP2A1O14983 AL135925.1-201ENST00000605920 1701 ntBASIC29.92■■■□□ 2.38
ATP2A1O14983 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
ATP2A1O14983 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ATP2A1O14983 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ATP2A1O14983 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ATP2A1O14983 AC127502.1-201ENST00000399971 1502 ntBASIC29.91■■■□□ 2.38
ATP2A1O14983 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
ATP2A1O14983 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
ATP2A1O14983 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.9■■■□□ 2.38
ATP2A1O14983 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.89■■■□□ 2.38
ATP2A1O14983 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.89■■■□□ 2.38
ATP2A1O14983 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.89■■■□□ 2.38
ATP2A1O14983 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
ATP2A1O14983 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.89■■■□□ 2.37
ATP2A1O14983 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
ATP2A1O14983 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
ATP2A1O14983 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
ATP2A1O14983 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.87■■■□□ 2.37
ATP2A1O14983 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.86■■■□□ 2.37
ATP2A1O14983 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
ATP2A1O14983 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.86■■■□□ 2.37
ATP2A1O14983 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ATP2A1O14983 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
ATP2A1O14983 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.85■■■□□ 2.37
ATP2A1O14983 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.85■■■□□ 2.37
ATP2A1O14983 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
ATP2A1O14983 AC135983.2-203ENST00000454486 1613 ntBASIC29.84■■■□□ 2.37
ATP2A1O14983 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ATP2A1O14983 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ATP2A1O14983 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ATP2A1O14983 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ATP2A1O14983 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
ATP2A1O14983 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
ATP2A1O14983 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
ATP2A1O14983 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
ATP2A1O14983 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.82■■■□□ 2.36
ATP2A1O14983 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.82■■■□□ 2.36
ATP2A1O14983 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
ATP2A1O14983 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ATP2A1O14983 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.81■■■□□ 2.36
ATP2A1O14983 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
ATP2A1O14983 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ATP2A1O14983 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ATP2A1O14983 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
ATP2A1O14983 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.79■■■□□ 2.36
ATP2A1O14983 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
ATP2A1O14983 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.78■■■□□ 2.36
ATP2A1O14983 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.78■■■□□ 2.36
ATP2A1O14983 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
ATP2A1O14983 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.77■■■□□ 2.36
ATP2A1O14983 WHAMMP2-203ENST00000563942 1603 ntBASIC29.77■■■□□ 2.36
ATP2A1O14983 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
ATP2A1O14983 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.76■■■□□ 2.35
ATP2A1O14983 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ATP2A1O14983 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
ATP2A1O14983 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
ATP2A1O14983 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
ATP2A1O14983 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.74■■■□□ 2.35
ATP2A1O14983 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.74■■■□□ 2.35
ATP2A1O14983 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ATP2A1O14983 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
ATP2A1O14983 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
ATP2A1O14983 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
ATP2A1O14983 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
ATP2A1O14983 AC008813.1-201ENST00000536597 885 ntBASIC29.69■■■□□ 2.34
ATP2A1O14983 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
ATP2A1O14983 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ATP2A1O14983 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ATP2A1O14983 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.68■■■□□ 2.34
ATP2A1O14983 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ATP2A1O14983 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
ATP2A1O14983 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.66■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms