Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
CHD2O14647 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC37.25■■■■□ 3.55
CHD2O14647 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
CHD2O14647 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC37.25■■■■□ 3.55
CHD2O14647 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC37.25■■■■□ 3.55
CHD2O14647 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC37.25■■■■□ 3.55
CHD2O14647 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC37.24■■■■□ 3.55
CHD2O14647 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC37.23■■■■□ 3.55
CHD2O14647 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC37.22■■■■□ 3.55
CHD2O14647 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
CHD2O14647 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC37.22■■■■□ 3.55
CHD2O14647 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
CHD2O14647 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC37.21■■■■□ 3.55
CHD2O14647 AC120057.4-201ENST00000624722 1615 ntBASIC37.2■■■■□ 3.55
CHD2O14647 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC37.2■■■■□ 3.54
CHD2O14647 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
CHD2O14647 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC37.18■■■■□ 3.54
CHD2O14647 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC37.18■■■■□ 3.54
CHD2O14647 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
CHD2O14647 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
CHD2O14647 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
CHD2O14647 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
CHD2O14647 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
CHD2O14647 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
CHD2O14647 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
CHD2O14647 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
CHD2O14647 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
CHD2O14647 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC37.15■■■■□ 3.54
CHD2O14647 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
CHD2O14647 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
CHD2O14647 AC022413.1-201ENST00000624602 984 ntBASIC37.13■■■■□ 3.53
CHD2O14647 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC37.12■■■■□ 3.53
CHD2O14647 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
CHD2O14647 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC37.11■■■■□ 3.53
CHD2O14647 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
CHD2O14647 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
CHD2O14647 HES4-202ENST00000428771 1040 ntTSL 2 BASIC37.09■■■■□ 3.53
CHD2O14647 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC37.08■■■■□ 3.53
CHD2O14647 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC37.08■■■■□ 3.53
CHD2O14647 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
CHD2O14647 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
CHD2O14647 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
CHD2O14647 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC37.07■■■■□ 3.52
CHD2O14647 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
CHD2O14647 AC008813.1-201ENST00000536597 885 ntBASIC37.06■■■■□ 3.52
CHD2O14647 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
CHD2O14647 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC37.05■■■■□ 3.52
CHD2O14647 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
CHD2O14647 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC37.05■■■■□ 3.52
CHD2O14647 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC37.03■■■■□ 3.52
CHD2O14647 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CHD2O14647 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC37.02■■■■□ 3.52
CHD2O14647 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
CHD2O14647 AL033527.3-201ENST00000566366 1196 ntBASIC37.02■■■■□ 3.52
CHD2O14647 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC37.01■■■■□ 3.52
CHD2O14647 GFER-205ENST00000569451 517 ntTSL 5 BASIC37.01■■■■□ 3.52
CHD2O14647 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.51
CHD2O14647 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC37■■■■□ 3.51
CHD2O14647 AC018358.1-201ENST00000631079 1402 ntBASIC37■■■■□ 3.51
CHD2O14647 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC37■■■■□ 3.51
CHD2O14647 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC36.99■■■■□ 3.51
CHD2O14647 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC36.98■■■■□ 3.51
CHD2O14647 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC36.97■■■■□ 3.51
CHD2O14647 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
CHD2O14647 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC36.97■■■■□ 3.51
CHD2O14647 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC36.96■■■■□ 3.51
CHD2O14647 AC060814.1-201ENST00000554326 538 ntBASIC36.96■■■■□ 3.51
CHD2O14647 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC36.95■■■■□ 3.51
CHD2O14647 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
CHD2O14647 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC36.94■■■■□ 3.5
CHD2O14647 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC36.94■■■■□ 3.5
CHD2O14647 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
CHD2O14647 U85056.1-201ENST00000616429 682 ntBASIC36.92■■■■□ 3.5
CHD2O14647 HYI-213ENST00000583037 1322 ntTSL 5 BASIC36.92■■■■□ 3.5
CHD2O14647 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC36.92■■■■□ 3.5
CHD2O14647 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
CHD2O14647 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
CHD2O14647 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC36.91■■■■□ 3.5
CHD2O14647 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC36.91■■■■□ 3.5
CHD2O14647 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC36.9■■■■□ 3.5
CHD2O14647 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC36.89■■■■□ 3.5
CHD2O14647 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
CHD2O14647 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
CHD2O14647 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC36.88■■■■□ 3.49
CHD2O14647 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
CHD2O14647 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC36.87■■■■□ 3.49
CHD2O14647 AC010864.1-201ENST00000609407 1511 ntBASIC36.87■■■■□ 3.49
CHD2O14647 AC148477.6-201ENST00000623746 465 ntBASIC36.86■■■■□ 3.49
CHD2O14647 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC36.86■■■■□ 3.49
CHD2O14647 KRT18P60-201ENST00000312876 1297 ntBASIC36.85■■■■□ 3.49
CHD2O14647 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
CHD2O14647 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
CHD2O14647 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC36.85■■■■□ 3.49
CHD2O14647 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC36.85■■■■□ 3.49
CHD2O14647 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
CHD2O14647 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC36.84■■■■□ 3.49
CHD2O14647 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
CHD2O14647 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC36.84■■■■□ 3.49
CHD2O14647 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC36.84■■■■□ 3.49
CHD2O14647 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC36.84■■■■□ 3.49
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms